Lineage for d2id0b4 (2id0 B:173-557)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 798661Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 799407Superfamily b.40.4: Nucleic acid-binding proteins [50249] (16 families) (S)
  5. 800326Family b.40.4.16: RNB domain-like [159112] (3 proteins)
    Pfam PF00773; RNase II catalytic domain; decorated OB-fold domain with extra C-terminal structures forming the active site
  6. 800327Protein Exoribonuclease 2, RNB [159117] (1 species)
    RNase II
  7. 800328Species Escherichia coli [TaxId:562] [159118] (3 PDB entries)
    Uniprot P30850 173-557
  8. 800331Domain d2id0b4: 2id0 B:173-557 [147613]
    Other proteins in same PDB: d2id0a1, d2id0a2, d2id0a3, d2id0b1, d2id0b2, d2id0b3, d2id0c1, d2id0c2, d2id0c3, d2id0d1, d2id0d2, d2id0d3
    automatically matched to 2ID0 A:173-557
    complexed with mn

Details for d2id0b4

PDB Entry: 2id0 (more details), 2.35 Å

PDB Description: escherichia coli rnase ii
PDB Compounds: (B:) Exoribonuclease 2

SCOP Domain Sequences for d2id0b4:

Sequence, based on SEQRES records: (download)

>d2id0b4 b.40.4.16 (B:173-557) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
eapdgvatemldeglvredltaldfvtidsastedmddalfakalpddklqlivaiadpt
awiaegskldkaakiraftnylpgfnipmlprelsddlcslranevrpvlacrmtlsadg
tiednieffaatieskaklvydqvsdwlentgdwqpeseaiaeqvrllaqicqrrgewrh
nhalvfkdrpdyrfilgekgevldivaeprrianriveeamiaanicaarvlrdklgfgi
ynvhmgfdpanadalaallkthglhvdaeevltldgfcklrreldaqptgfldsrirrfq
sfaeistepgphfglgleayatwtspirkygdminhrllkavikgetatrpqdeitvqma
errrlnrmaerdvgdwlyarflkdk

Sequence, based on observed residues (ATOM records): (download)

>d2id0b4 b.40.4.16 (B:173-557) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
eapdgvatemldeglvredltaldfvtidsastedmddalfakalpddklqlivaiadpt
awiaegskldkaakiraftnylpgfnipmlprelsddlcslranevrpvlacrmtlsadg
tiednieffaatieskaklvydqvsdwlentgdwqpeseaiaeqvrllaqicqrrgewrh
nhalvfkdrpdyrfilgekgevldivaeprrianriveeamiaanicaarvlrdklgfgi
ynvhmgfdpanadalaallkthglhvdaeevltldgfcklrreldaqptgfldsrirrfq
sfaeistepgphfglgleayatwtspirkygdminhrllkavikgrpqdeitvqmaerrr
lnrmaerdvgdwlyarflkdk

SCOP Domain Coordinates for d2id0b4:

Click to download the PDB-style file with coordinates for d2id0b4.
(The format of our PDB-style files is described here.)

Timeline for d2id0b4: