Lineage for d2ibka1 (2ibk A:241-341)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3008406Fold d.240: Lesion bypass DNA polymerase (Y-family), little finger domain [100878] (1 superfamily)
    beta-alpha-beta(2)-alpha-beta; antiparallel beta-sheet: order 1423; "reversed" ferredoxin-like topology
  4. 3008407Superfamily d.240.1: Lesion bypass DNA polymerase (Y-family), little finger domain [100879] (2 families) (S)
  5. 3008408Family d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domain [100880] (5 proteins)
  6. 3008409Protein DinB homolog (DBH) [100881] (3 species)
  7. 3008418Species Sulfolobus solfataricus, DNA polymerase IV [TaxId:2287] [100882] (35 PDB entries)
  8. 3008429Domain d2ibka1: 2ibk A:241-341 [147598]
    Other proteins in same PDB: d2ibka2
    automated match to d1jx4a1
    protein/DNA complex; complexed with bap, ca, edo, gol, pop

Details for d2ibka1

PDB Entry: 2ibk (more details), 2.25 Å

PDB Description: Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap
PDB Compounds: (A:) DNA polymerase IV

SCOPe Domain Sequences for d2ibka1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ibka1 d.240.1.1 (A:241-341) DinB homolog (DBH) {Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]}

SCOPe Domain Coordinates for d2ibka1:

Click to download the PDB-style file with coordinates for d2ibka1.
(The format of our PDB-style files is described here.)

Timeline for d2ibka1: