SCOPe 2.07: Domain d2i9fd2: 2i9f D:50-105

Lineage for d2i9fd2 (2i9f D:50-105)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.254: Nucleocapsid protein dimerization domain [103067] (1 superfamily)
   dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta

4. Superfamily d.254.1: Nucleocapsid protein dimerization domain [103068] (3 families)

5. Family d.254.1.1: Arterivirus nucleocapsid protein [103069] (1 protein)
   automatically mapped to Pfam PF01481

6. Protein Arterivirus nucleocapsid protein [103070] (2 species)

7. Species Equine arteritis virus [TaxId:11047] [160463] (1 PDB entry)
   Uniprot Q66526 50-105

8. Domain d2i9fd2: 2i9f D:50-105 [147570]
   Other proteins in same PDB: d2i9fa2, d2i9fb3, d2i9fd3
   automated match to d2i9fa1
   complexed with cl, dtt, gol, na

Details for d2i9fd2

PDB Entry: 2i9f, 2 Å

PDB Description: Structure of the equine arterivirus nucleocapsid protein

PDB Compounds: (D:) Nucleocapsid

SCOPe Domain Sequences for d2i9fd2:

Sequence; same for both SEQRES and ATOM records:

>d2i9fd2 d.254.1.1 (D:50-105) Arterivirus nucleocapsid protein {Equine arteritis virus [TaxId: 11047]}
epgdlrhdlnqqeratlssnvqrffmighgsltadaggltytvswvptkqiqrkva

Timeline for d2i9fd2:

• d2i9fd2 first appeared in SCOP 1.75, called d2i9fd1
  
• d2i9fd2 appears in SCOPe 2.06
  
• d2i9fd2 appears in the current release, SCOPe 2.08