Lineage for d2dk5a1 (2dk5 A:8-85)

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2691777Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2692959Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families) (S)
    contains a small beta-sheet (wing)
  5. 2694526Family a.4.5.85: RPO3F domain-like [158341] (1 protein)
    middle region of Pfam PF05158
  6. 2694527Protein DNA-directed RNA polymerase III subunit RPC6, RPO3F [158342] (2 species)
  7. 2694528Species Human (Homo sapiens) [TaxId:9606] [158344] (1 PDB entry)
    Uniprot Q9H1D9 78-155
  8. 2694529Domain d2dk5a1: 2dk5 A:8-85 [146534]
    Other proteins in same PDB: d2dk5a2, d2dk5a3

Details for d2dk5a1

PDB Entry: 2dk5 (more details)

PDB Description: solution structure of winged-helix domain in rna polymerase iii 39kda polypeptide
PDB Compounds: (A:) DNA-directed RNA polymerase III 39 kDa polypeptide

SCOPe Domain Sequences for d2dk5a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2dk5a1 a.4.5.85 (A:8-85) DNA-directed RNA polymerase III subunit RPC6, RPO3F {Human (Homo sapiens) [TaxId: 9606]}
dsqnagkmkgsdnqeklvyqiiedagnkgiwsrdvryksnlplteinkilknleskklik
avksvaaskkkvymlynl

SCOPe Domain Coordinates for d2dk5a1:

Click to download the PDB-style file with coordinates for d2dk5a1.
(The format of our PDB-style files is described here.)

Timeline for d2dk5a1: