SCOPe 2.08: Domain d2ckdb_: 2ckd B:

Lineage for d2ckdb_ (2ckd B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (61 families)

5. Family c.66.1.57: ML2640-like [159694] (2 proteins)
   Pfam PF02409; O-methyltransferase N-terminus (DUF142); most similar structure to the Leucine carboxy methyltransferase Ppm1 family

6. Protein automated matches [190566] (1 species)
   not a true protein

7. Species Mycobacterium leprae [TaxId:1769] [187556] (3 PDB entries)

8. Domain d2ckdb_: 2ckd B: [146410]
   Other proteins in same PDB: d2ckda1
   automated match to d2ckda1

Details for d2ckdb_

PDB Entry: 2ckd, 2.8 Å

PDB Description: crystal structure of ml2640 from mycobacterium leprae

PDB Compounds: (B:) putative s-adenosyl-l-methionine-dependent methyltransferase ml2640

SCOPe Domain Sequences for d2ckdb_:

Sequence; same for both SEQRES and ATOM records:

>d2ckdb_ c.66.1.57 (B:) automated matches {Mycobacterium leprae [TaxId: 1769]}
svgttavmvaaaraaetdrpdalirdpyakllvtntgagalweamldpsmvakveaidae
aaamvehmrsyqavrtnffdtyfnnavidgirqfvilasgldsrayrldwptgttvyeid
qpkvlayksttlaehgvtptadrrevpidlrqdwppalrsagfdpsartawlaegllmyl
pataqdglfteigglsavgsriavetsplhgdewreqmqlrfrrvsdalgfeqavdvqel
iyhdenravvadwlnrhgwrataqsapdemrrvgrwgdgvpmaddkdafaefvtahrl

Timeline for d2ckdb_:

• d2ckdb_ first appeared in SCOP 1.75, called d2ckdb1
  
• d2ckdb_ appears in SCOPe 2.07