SCOPe 2.06: Domain d2c39d2: 2c39 D:156-248

Lineage for d2c39d2 (2c39 D:156-248)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.101: Ribonuclease PH domain 2-like [55665] (1 superfamily)
   beta(2)-alpha-beta(2)-alpha; 3 layers: alpha/beta/alpha; antiparallel sheet: order 2134

4. Superfamily d.101.1: Ribonuclease PH domain 2-like [55666] (2 families)

5. Family d.101.1.1: Ribonuclease PH domain 2-like [55667] (11 proteins)

6. Protein Exosome complex exonuclease 1, ECX1 [160590] (2 species)

7. Species Sulfolobus solfataricus [TaxId:2287] [160591] (9 PDB entries)
   Uniprot Q9UXC2 156-241! Uniprot Q9UXC2 156-248

8. Domain d2c39d2: 2c39 D:156-248 [146331]
   Other proteins in same PDB: d2c39a1, d2c39a2, d2c39b1, d2c39c1, d2c39c2, d2c39d1, d2c39e1, d2c39e2, d2c39f1, d2c39g1, d2c39g2, d2c39i1, d2c39i2, d2c39j1, d2c39k1, d2c39k2, d2c39l1, d2c39m1, d2c39m2, d2c39n1, d2c39o1, d2c39o2, d2c39p1, d2c39q1, d2c39q2, d2c39r1, d2c39s1, d2c39s2, d2c39t1, d2c39u1, d2c39u2, d2c39v1, d2c39w1, d2c39w2, d2c39x1
   automatically matched to 2BR2 B:156-248
   protein/RNA complex; complexed with adp

Details for d2c39d2

PDB Entry: 2c39, 3.3 Å

PDB Description: rnase ph core of the archaeal exosome in complex with adp

PDB Compounds: (D:) probable exosome complex exonuclease 1

SCOPe Domain Sequences for d2c39d2:

Sequence; same for both SEQRES and ATOM records:

>d2c39d2 d.101.1.1 (D:156-248) Exosome complex exonuclease 1, ECX1 {Sulfolobus solfataricus [TaxId: 2287]}
pmrdliagvavgkadgviildlnetedmwgeadmpiammpslnqvtlfqlngsmtpdefr
qafdlavkginiiynlerealkskyvefkeegv

Timeline for d2c39d2:

• d2c39d2 first appeared in SCOP 1.75
  
• d2c39d2 appears in SCOPe 2.05
  
• d2c39d2 appears in SCOPe 2.07
  
• d2c39d2 appears in the current release, SCOPe 2.08