SCOP 1.75: Domain d2bonb1: 2bon B:5-299

Lineage for d2bonb1 (2bon B:5-299)

1. Root: SCOP 1.75

2. Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)

3. Fold e.52: NAD kinase/diacylglycerol kinase-like [111330] (1 superfamily)
   2 domains: d1 [alpha/beta; related to the PFK N-terminal domain ((53784))]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]
   2 domains: d1 [alpha/beta; related to the PFK N-terminal domain ((53784))]; d2 [all-beta; atypical beta-sandwich made of 4 structural repeats of beta(3) unit]

4. Superfamily e.52.1: NAD kinase/diacylglycerol kinase-like [111331] (2 families)

5. Family e.52.1.2: Diacylglycerol kinase-like [160984] (2 proteins)
   N-terminal, catalytic domain is covered by Pfam PF00781

6. Protein Lipid kinase YegS [160985] (2 species)

7. Species Escherichia coli [TaxId:562] [160987] (2 PDB entries)
   Uniprot P76407 4-299! Uniprot P76407 5-299

8. Domain d2bonb1: 2bon B:5-299 [146164]
   automatically matched to 2BON A:5-299
   complexed with mg

Details for d2bonb1

PDB Entry: 2bon, 1.9 Å

PDB Description: structure of an escherichia coli lipid kinase (yegs)

PDB Compounds: (B:) lipid kinase

SCOP Domain Sequences for d2bonb1:

Sequence, based on SEQRES records:

>d2bonb1 e.52.1.2 (B:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
pasllilngkstdnlplreaimllreegmtihvrvtwekgdaaryveearkfgvatviag
ggdgtinevstaliqcegddipalgilplgtandfatsvgipealdkalklaiagdaiai
dmaqvnkqtcfinmatggfgtrittetpeklkaalgsvsyiihglmrmdtlqpdrceirg
enfhwqgdalvigigngrqagggqqlcpnalindgllqlriftgdeilpalvstlksded
npniiegasswfdiqaphditfnldgeplsgqnfhieilpaalrcrlppdcpllr

Sequence, based on observed residues (ATOM records):

>d2bonb1 e.52.1.2 (B:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
pasllilngkstdnlplreaimllreegmtihvrvtwekgdaaryveearkfgvatviag
ggdgtinevstaliqcegddipalgilplgtandfatsvgipealdkalklaiagdaiai
dmaqvnkqtcfinmatggfgtrivsyiihglmrmdtlqpdrceirgenfhwqgdalvigi
gngrqagggqqlcpnalindgllqlriftpniiegasswfdiqaphditfnldgeplsgq
nfhieilpaalrcrlppdcpllr

Timeline for d2bonb1:

• d2bonb1 is new in SCOP 1.75
  
• d2bonb1 appears in SCOPe 2.01
  
• d2bonb1 appears in the current release, SCOPe 2.08, called d2bonb2