SCOPe 2.07: Domain d1zb5a1: 1zb5 A:1-239,A:308-361

Lineage for d1zb5a1 (1zb5 A:1-239,A:308-361)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.5: Type II chitinase [51534] (15 proteins)
   glycosylase family 18

6. Protein Signal processing protein (SPC-40, MGP-40) [89480] (5 species)
   secreted during involution

7. Species Pig (Sus scrofa) [TaxId:9823] [117369] (4 PDB entries)
   Uniprot Q5UC99

8. Domain d1zb5a1: 1zb5 A:1-239,A:308-361 [145983]
   Other proteins in same PDB: d1zb5a2
   automatically matched to d1owqa1

Details for d1zb5a1

PDB Entry: 1zb5, 2.45 Å

PDB Description: recognition of peptide ligands by signalling protein from porcine mammary gland (spp-40): crystal structure of the complex of spp-40 with a peptide trp-pro-trp at 2.45a resolution

PDB Compounds: (A:) signal processing protein

SCOPe Domain Sequences for d1zb5a1:

Sequence; same for both SEQRES and ATOM records:

>d1zb5a1 c.1.8.5 (A:1-239,A:308-361) Signal processing protein (SPC-40, MGP-40) {Pig (Sus scrofa) [TaxId: 9823]}
yklicyytswsqyregdgscfpdaidpflcthviysfanisnneidtwewndvtlydtln
tlknrnpnlktllsvggwnfgpqrfskiasktqsrrtfiksvppflrthgfdgldlawly
pgrrdkrhlttlvkemkaefireaqagteqlllsaavsagkiaidrgydiaqisrhldfi
slltydfhgawrqtvghhsplfrgqedassrfsnadyavsymlrlgapanklvmgiptXd
dqesvknkarylknrqlagamvwaldlddfrgtfcgqnltfpltsavkdvlar

Timeline for d1zb5a1:

• d1zb5a1 first appeared in SCOP 1.75
  
• d1zb5a1 appears in SCOPe 2.06
  
• d1zb5a1 appears in the current release, SCOPe 2.08