SCOPe 2.07: Domain d2z0ea_: 2z0e A:

Lineage for d2z0ea_ (2z0e A:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.22: Autophagin-like [159858] (3 proteins)
   Pfam PF03416

6. Protein automated matches [190846] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188165] (3 PDB entries)

8. Domain d2z0ea_: 2z0e A: [145770]
   Other proteins in same PDB: d2z0eb_
   automated match to d2z0da1

Details for d2z0ea_

PDB Entry: 2z0e, 1.9 Å

PDB Description: the crystal structure of human atg4b- lc3(1-124) complex

PDB Compounds: (A:) Cysteine protease ATG4B

SCOPe Domain Sequences for d2z0ea_:

Sequence, based on SEQRES records:

>d2z0ea_ d.3.1.22 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
atltydtlrfaefedfpetsepvwilgrkysiftekdeilsdvasrlwftyrknfpaigg
tgptsdtgwgcmlrcgqmifaqalvcrhlgrdwrwtqrkrqpdsyfsvlnafidrkdsyy
sihqiaqmgvgegksigqwygpntvaqvlkklavfdtwsslavhiamdntvvmeeirrlc
rtsvpcagatafpadsdrhcngfpagaevtnrpspwrplvlliplrlgltdineayvetl
khcfmmpqslgviggkpnsahyfigyvgeeliyldpattqpaveptdgcfipdesfhcqh
ppcrmsiaeldpsiavgffckteddfndwcqqvkklsllggalpmfelveq

Sequence, based on observed residues (ATOM records):

>d2z0ea_ d.3.1.22 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
atltydtlrfaefedfpetsepvwilgrkysiftekdeilsdvasrlwftyrknfpaigg
tgptsdtgwgcmlrcgqmifaqalvcrhlgrdwrwtqrkrqpdsyfsvlnafidrkdsyy
sihqiaqmgvgegksigqwygpntvaqvlkklavfdtwsslavhiamdntvvmeeirrlc
rtspwrplvlliplrlgltdineayvetlkhcfmmpqslgviggkpnsahyfigyvgeel
iyldpattqpavepipdesfhcqhppcrmsiaeldpsiavgffckteddfndwcqqvkkl
sllggalpmfelveq

Timeline for d2z0ea_:

• d2z0ea_ first appeared in SCOP 1.75, called d2z0ea1
  
• d2z0ea_ appears in SCOPe 2.06
  
• d2z0ea_ appears in the current release, SCOPe 2.08