Lineage for d2uubu1 (2uub U:2-25)

  1. Root: SCOPe 2.08
  2. 3045664Class j: Peptides [58231] (151 folds)
  3. 3046032Fold j.9: Arg-rich RNA binding peptides [58321] (7 superfamilies)
  4. 3046033Superfamily j.9.1: 30S ribosomal protein THX [58322] (1 family) (S)
  5. 3046034Family j.9.1.1: 30S ribosomal protein THX [58323] (1 protein)
  6. 3046035Protein 30S ribosomal protein THX [58324] (1 species)
  7. 3046036Species Thermus thermophilus [TaxId:274] [58325] (44 PDB entries)
    Uniprot P62612
  8. 3046044Domain d2uubu1: 2uub U:2-25 [145756]
    Other proteins in same PDB: d2uubb1, d2uubc1, d2uubc2, d2uubd1, d2uube1, d2uube2, d2uubf1, d2uubg1, d2uubh1, d2uubj1, d2uubk1, d2uubl1, d2uubm1, d2uubn1, d2uubo1, d2uubp1, d2uubq1, d2uubr1, d2uubs1, d2uubt1
    automatically matched to 1YL4 X:2-25
    protein/RNA complex; complexed with k, mg, par, zn

Details for d2uubu1

PDB Entry: 2uub (more details), 2.8 Å

PDB Description: structure of the thermus thermophilus 30s ribosomal subunit complexed with a valine-asl with cmo5u in position 34 bound to an mrna with a guu-codon in the a-site and paromomycin.
PDB Compounds: (U:) 30S ribosomal protein Thx

SCOPe Domain Sequences for d2uubu1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2uubu1 j.9.1.1 (U:2-25) 30S ribosomal protein THX {Thermus thermophilus [TaxId: 274]}
gkgdrrtrrgkiwrgtygkyrprk

SCOPe Domain Coordinates for d2uubu1:

Click to download the PDB-style file with coordinates for d2uubu1.
(The format of our PDB-style files is described here.)

Timeline for d2uubu1: