SCOPe 2.04: Domain d2j28o1: 2j28 O:1-117

Lineage for d2j28o1 (2j28 O:1-117)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.4: Translational machinery components [53137] (3 families)

5. Family c.55.4.1: Ribosomal protein L18 and S11 [53138] (2 proteins)

6. Protein Ribosomal protein L18 (L18p) [53139] (5 species)

7. Species Escherichia coli [TaxId:562] [159642] (29 PDB entries)
   Uniprot P0C018 1-117

8. Domain d2j28o1: 2j28 O:1-117 [145636]
   Other proteins in same PDB: d2j2801, d2j2811, d2j2821, d2j2831, d2j2841, d2j28c1, d2j28c2, d2j28d1, d2j28e1, d2j28f1, d2j28g1, d2j28g2, d2j28h1, d2j28h2, d2j28i1, d2j28i2, d2j28j1, d2j28k1, d2j28l1, d2j28m1, d2j28n1, d2j28p1, d2j28q1, d2j28r1, d2j28s1, d2j28t1, d2j28u1, d2j28v1, d2j28w1, d2j28x1, d2j28y1, d2j28z1
   automatically matched to 2AW4 O:1-117
   protein/RNA complex; complexed with mg

Details for d2j28o1

PDB Entry: 2j28, 8 Å

PDB Description: model of e. coli srp bound to 70s rncs

PDB Compounds: (O:) 50S ribosomal protein L18

SCOPe Domain Sequences for d2j28o1:

Sequence; same for both SEQRES and ATOM records:

>d2j28o1 c.55.4.1 (O:1-117) Ribosomal protein L18 (L18p) {Escherichia coli [TaxId: 562]}
mdkksarirratrarrklqelgatrlvvhrtprhiyaqviapngsevlvaastvekaiae
qlkytgnkdaaaavgkavaeralekgikdvsfdrsgfqyhgrvqaladaareaglqf

Timeline for d2j28o1:

• d2j28o1 first appeared in SCOP 1.75
  
• d2j28o1 appears in SCOPe 2.03
  
• d2j28o1 appears in SCOPe 2.05
  
• d2j28o1 appears in the current release, SCOPe 2.08