Lineage for d2i5ys1 (2i5y S:2-27)

  1. Root: SCOPe 2.04
  2. 1715088Class k: Designed proteins [58788] (44 folds)
  3. 1715455Fold k.23: Scorpion toxin-based designs [58917] (1 superfamily)
  4. 1715456Superfamily k.23.1: Scorpion toxin-based designs [58918] (2 families) (S)
  5. 1715461Family k.23.1.2: Mini-protein reproducing the core of the CD4 surface [58922] (1 protein)
  6. 1715462Protein Mini-protein reproducing the core of the CD4 surface [58923] (1 species)
    interacting with the hiv-1 envelope glycoprotein
  7. 1715463Species Synthetic [58924] (5 PDB entries)
  8. 1715467Domain d2i5ys1: 2i5y S:2-27 [145505]
    Other proteins in same PDB: d2i5yg_, d2i5yh1, d2i5yh2, d2i5yl1, d2i5yl2, d2i5yp_, d2i5yq1, d2i5yq2, d2i5yr1, d2i5yr2
    complexed with nag, ndg

Details for d2i5ys1

PDB Entry: 2i5y (more details), 2.2 Å

PDB Description: crystal structure of cd4m47, a scorpion-toxin mimic of cd4, in complex with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody 17b
PDB Compounds: (S:) cd4m47, scorpion-toxin mimic of cd4

SCOPe Domain Sequences for d2i5ys1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2i5ys1 k.23.1.2 (S:2-27) Mini-protein reproducing the core of the CD4 surface {Synthetic}
nlhfcqlrckslgllgrcaptfcacx

SCOPe Domain Coordinates for d2i5ys1:

Click to download the PDB-style file with coordinates for d2i5ys1.
(The format of our PDB-style files is described here.)

Timeline for d2i5ys1: