Lineage for d2i5ym1 (2i5y M:2-27)

  1. Root: SCOPe 2.06
  2. 2245226Class k: Designed proteins [58788] (44 folds)
  3. 2245593Fold k.23: Scorpion toxin-based designs [58917] (1 superfamily)
  4. 2245594Superfamily k.23.1: Scorpion toxin-based designs [58918] (2 families) (S)
  5. 2245599Family k.23.1.2: Mini-protein reproducing the core of the CD4 surface [58922] (1 protein)
  6. 2245600Protein Mini-protein reproducing the core of the CD4 surface [58923] (1 species)
    interacting with the hiv-1 envelope glycoprotein
  7. 2245601Species Synthetic [58924] (5 PDB entries)
  8. 2245604Domain d2i5ym1: 2i5y M:2-27 [145504]
    Other proteins in same PDB: d2i5yg2, d2i5yg3, d2i5yh1, d2i5yh2, d2i5yl1, d2i5yl2, d2i5yp2, d2i5yp3, d2i5yq1, d2i5yq2, d2i5yr1, d2i5yr2
    complexed with nag, ndg

Details for d2i5ym1

PDB Entry: 2i5y (more details), 2.2 Å

PDB Description: crystal structure of cd4m47, a scorpion-toxin mimic of cd4, in complex with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody 17b
PDB Compounds: (M:) cd4m47, scorpion-toxin mimic of cd4

SCOPe Domain Sequences for d2i5ym1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2i5ym1 k.23.1.2 (M:2-27) Mini-protein reproducing the core of the CD4 surface {Synthetic}
nlhfcqlrckslgllgrcaptfcacx

SCOPe Domain Coordinates for d2i5ym1:

Click to download the PDB-style file with coordinates for d2i5ym1.
(The format of our PDB-style files is described here.)

Timeline for d2i5ym1: