Lineage for d2gybi1 (2gyb I:4-129)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2157367Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
    core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
  4. 2157368Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families) (S)
  5. 2157369Family d.14.1.1: Translational machinery components [54212] (4 protein domains)
  6. 2157479Protein Ribosomal protein S9 [54218] (2 species)
  7. 2157480Species Escherichia coli [TaxId:562] [159907] (26 PDB entries)
    Uniprot P0A7X3 3-129
  8. 2157505Domain d2gybi1: 2gyb I:4-129 [145256]
    Other proteins in same PDB: d2gybb1, d2gybd1, d2gybh1, d2gybm1, d2gybp1, d2gybq1, d2gybs1, d2gybt1
    protein/RNA complex
    protein/RNA complex

Details for d2gybi1

PDB Entry: 2gyb (more details), 15 Å

PDB Description: Structure of the 30S subunit of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143
PDB Compounds: (I:) 30S ribosomal subunit protein S9

SCOPe Domain Sequences for d2gybi1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2gybi1 d.14.1.1 (I:4-129) Ribosomal protein S9 {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d2gybi1:

Click to download the PDB-style file with coordinates for d2gybi1.
(The format of our PDB-style files is described here.)

Timeline for d2gybi1: