Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds) |
Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily) Multidomain subunits of complex domain organization |
Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (2 families) The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit |
Family e.29.1.1: RNA-polymerase beta [64485] (3 proteins) |
Protein RNA-polymerase beta [64488] (2 species) |
Species Thermus aquaticus [TaxId:271] [64489] (4 PDB entries) |
Domain d2ghoc1: 2gho C:1-1114 [145196] Other proteins in same PDB: d2ghoa1, d2ghoa2, d2ghob1, d2ghob2, d2ghod1 automatically matched to 1YNJ C:1-1114 protein/RNA complex |
PDB Entry: 2gho (more details), 5 Å
SCOPe Domain Sequences for d2ghoc1:
Sequence; same for both SEQRES and ATOM records: (download)
>d2ghoc1 e.29.1.1 (C:1-1114) RNA-polymerase beta {Thermus aquaticus [TaxId: 271]} meikrfgrireviplpplteiqvesykkalqadvppekrenvgiqaafketfpieegdkg kgglvldfleyrigdppfsqdecrekdltyqaplyarlqlihkdtglikedevflghlpl mtedgsfiingadrvivsqihrspgvyftpdparpgryiasiiplpkrgpwidleveasg vvtmkvnkrkfplvlllrvlgydqetlvrelsaygdlvqglldeavlamrpeeamvrlft llrpgdppkkdkalaylfglladpkrydlgeagrykaeeklgvglsgrtlvrfedgefkd evflptlrylfaltagvpghevddidhlgnrrirtvgelmadqfrvglarlargvrermv mgspdtltpaklvnsrpleaalreffsrsqlsqfkdetnplsslrhkrrisalgpggltr eragfdvrdvhrthygricpvetpeganiglitslaayarvdalgfirtpyrrvkngvvt eevvymtaseedrytiaqantplegdriatdrvvarrrgepvivapeevefmdvspkqvf slntnlipflehddanralmgsnmqtqavpliraqapvvmtgleervvrdslaalyaeed gevvkvdgtriavryedgrlvehplrryarsnqgtafdqrprvrvgqrvkkgdlladgpa seegflalgqnvlvaimpfdgynfedaiviseellkrdfytsihieryeieardtklgpe ritrdiphlseaalrdldeegivrigaevkpgdilvgrtsfkgeqepspeerllrsifge kardvkdtslrvppgeggivvgrlrlrrgdpgvelkpgvrevvrvfvaqkrklqvgdkla nrhgnkgvvakilpvedmphlpdgtpvdvilnplgvpsrmnlgqilethlglagyflgqr yispvfdgatepeikellaeafnlyfgkrqgegfgvdkrekevlaraeklglvspgkspe eqlkelfdlgkvvlydgrtgepfegpivvgqmfimklyhmvedkmharstgpyslitqqp lggkaqfggqrfgemevwaleaygaahtlqemltiksddiegrnaayqaiikgedvpeps vpesfrvlvkelqalaldvqtldekdnpvdifeg
Timeline for d2ghoc1: