Lineage for d2a5yb1 (2a5y B:386-543)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2304501Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2305606Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (86 families) (S)
    contains a small beta-sheet (wing)
  5. 2307114Family a.4.5.80: CED-4 C-terminal domain-like [158326] (1 protein)
    similar domain architecture to AAA+ helicases
  6. 2307115Protein Cell death protein 4, CED-4 [158327] (1 species)
  7. 2307116Species Nematode (Caenorhabditis elegans) [TaxId:6239] [158328] (1 PDB entry)
    Uniprot P30429 386-543
  8. 2307117Domain d2a5yb1: 2a5y B:386-543 [144786]
    Other proteins in same PDB: d2a5ya_, d2a5yb2, d2a5yb3, d2a5yc1
    complexed with atp, mg

Details for d2a5yb1

PDB Entry: 2a5y (more details), 2.6 Å

PDB Description: Structure of a CED-4/CED-9 complex
PDB Compounds: (B:) ced-4

SCOPe Domain Sequences for d2a5yb1:

Sequence, based on SEQRES records: (download)

>d2a5yb1 a.4.5.80 (B:386-543) Cell death protein 4, CED-4 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

Sequence, based on observed residues (ATOM records): (download)

>d2a5yb1 a.4.5.80 (B:386-543) Cell death protein 4, CED-4 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

SCOPe Domain Coordinates for d2a5yb1:

Click to download the PDB-style file with coordinates for d2a5yb1.
(The format of our PDB-style files is described here.)

Timeline for d2a5yb1: