Lineage for d1z3gl1 (1z3g L:1-106)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2740696Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2741215Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88528] (43 PDB entries)
    Uniprot P04940 # KV6F_MOUSE IG KAPPA CHAIN V-VI REGION NQ2-17.4.1
  8. 2741279Domain d1z3gl1: 1z3g L:1-106 [144733]
    Other proteins in same PDB: d1z3gh1, d1z3gh2, d1z3gi1, d1z3gi2, d1z3gl2, d1z3gm2

Details for d1z3gl1

PDB Entry: 1z3g (more details), 3.3 Å

PDB Description: crystal structure of complex between pvs25 and fab fragment of malaria transmission blocking antibody 2a8
PDB Compounds: (L:) 2A8 Fab Light Chain

SCOPe Domain Sequences for d1z3gl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1z3gl1 b.1.1.1 (L:1-106) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}

SCOPe Domain Coordinates for d1z3gl1:

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Timeline for d1z3gl1: