Lineage for d1yylm1 (1yyl M:2-27)

  1. Root: SCOPe 2.02
  2. 1253041Class k: Designed proteins [58788] (44 folds)
  3. 1253408Fold k.23: Scorpion toxin-based designs [58917] (1 superfamily)
  4. 1253409Superfamily k.23.1: Scorpion toxin-based designs [58918] (2 families) (S)
  5. 1253414Family k.23.1.2: Mini-protein reproducing the core of the CD4 surface [58922] (1 protein)
  6. 1253415Protein Mini-protein reproducing the core of the CD4 surface [58923] (1 species)
    interacting with the hiv-1 envelope glycoprotein
  7. 1253416Species Synthetic [58924] (5 PDB entries)
  8. 1253423Domain d1yylm1: 1yyl M:2-27 [144721]
    Other proteins in same PDB: d1yylg_, d1yylh1, d1yylh2, d1yyll1, d1yyll2, d1yylp_, d1yylq1, d1yylq2, d1yylr1, d1yylr2
    complexed with nag, ndg

Details for d1yylm1

PDB Entry: 1yyl (more details), 2.75 Å

PDB Description: crystal structure of cd4m33, a scorpion-toxin mimic of cd4, in complex with hiv-1 yu2 gp120 envelope glycoprotein and anti-hiv-1 antibody 17b
PDB Compounds: (M:) CD4M33, scorpion-toxin mimic of CD4

SCOPe Domain Sequences for d1yylm1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yylm1 k.23.1.2 (M:2-27) Mini-protein reproducing the core of the CD4 surface {Synthetic}
nlhfcqlrckslgllgkcagsfcacx

SCOPe Domain Coordinates for d1yylm1:

Click to download the PDB-style file with coordinates for d1yylm1.
(The format of our PDB-style files is described here.)

Timeline for d1yylm1: