Lineage for d1yyfd1 (1yyf D:2-181)

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 875596Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 875597Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (7 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 875747Family d.153.1.4: Proteasome subunits [56251] (3 proteins)
  6. 875748Protein HslV (ClpQ) protease [56258] (4 species)
    dodecameric prokaryotic homologue of proteasome
  7. 875749Species Bacillus subtilis [TaxId:1423] [160845] (3 PDB entries)
    Uniprot P39070 2-181
  8. 875775Domain d1yyfd1: 1yyf D:2-181 [144720]
    Other proteins in same PDB: d1yyfa1, d1yyfb1
    automatically matched to 1YYF C:2-181
    complexed with adp

Details for d1yyfd1

PDB Entry: 1yyf (more details), 4.16 Å

PDB Description: Correction of X-ray Intensities from an HslV-HslU co-crystal containing lattice translocation defects
PDB Compounds: (D:) ATP-dependent protease hslv

SCOP Domain Sequences for d1yyfd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yyfd1 d.153.1.4 (D:2-181) HslV (ClpQ) protease {Bacillus subtilis [TaxId: 1423]}
ssfhattifavqhkgrsamsgdgqvtfgqavvmkhtarkvrklfngkvlagfagsvadaf
tlfekfeakleeyngnlkraavelakewrsdkvlrkleamlivmnqdtlllvsgtgevie
pddgilaigsggnyalaagralkkhagesmsaseiaraaletageicvytndqiileele

SCOP Domain Coordinates for d1yyfd1:

Click to download the PDB-style file with coordinates for d1yyfd1.
(The format of our PDB-style files is described here.)

Timeline for d1yyfd1: