Lineage for d1yq9i_ (1yq9 I:)

  1. Root: SCOPe 2.07
  2. 2618030Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2624340Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
    3 domains: (1) all-alpha; (2&3) alpha+beta
  4. 2624341Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families) (S)
  5. 2624342Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)
  6. 2624373Protein automated matches [190109] (8 species)
    not a true protein
  7. 2624451Species Desulfovibrio gigas [TaxId:879] [188148] (1 PDB entry)
  8. 2624452Domain d1yq9i_: 1yq9 I: [144717]
    Other proteins in same PDB: d1yq9a_, d1yq9b_, d1yq9h1
    automated match to d1frvb_
    complexed with f3s, fco, gol, h2s, mg, ni, per, sf4

Details for d1yq9i_

PDB Entry: 1yq9 (more details), 2.35 Å

PDB Description: structure of the unready oxidized form of [nife] hydrogenase
PDB Compounds: (I:) Periplasmic [NiFe] hydrogenase Large subunit

SCOPe Domain Sequences for d1yq9i_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yq9i_ e.18.1.1 (I:) automated matches {Desulfovibrio gigas [TaxId: 879]}
nkivvdpitrieghlrieveveggkiknawsmstlfrglemilkgrdprdaqhftqracg
vctyvhalasvravdncvgvkipenatlmrnltmgaqymhdhlvhfyhlhaldwvnvana
lnadpakaarlandlsprkttteslkavqakvkalvesgqlgiftnayflgghpayvlpa
evdliatahylealrvqvkaaramaifgaknphtqftvvggctnydslrperiaefrkly
kevrefieqvyitdllavagfyknwagigktsnfltcgefptdeydlnsrytpqgviwgn
dlskvddfnpdlieehvkyswyegadahhpykgvtkpkwtefhgedryswmkaprykgea
fevgplasvlvayakkheptvkavdlvlktlgvgpealfstlgrtaargiqcltaaqeve
vwldkleanvkagkddlytdwqyptesqgvgfvnaprgmlshwivqrggkienfqlvvps
twnlgprcaegklsaveqaligtpiadpkrpveilrtvhsydpciacgvh

SCOPe Domain Coordinates for d1yq9i_:

Click to download the PDB-style file with coordinates for d1yq9i_.
(The format of our PDB-style files is described here.)

Timeline for d1yq9i_: