SCOPe 2.07: Domain d1yq9h1: 1yq9 H:7-536

Lineage for d1yq9h1 (1yq9 H:7-536)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein Nickel-iron hydrogenase, large subunit [56764] (5 species)

7. Species Desulfovibrio gigas [TaxId:879] [56765] (3 PDB entries)

8. Domain d1yq9h1: 1yq9 H:7-536 [144716]
   Other proteins in same PDB: d1yq9a_, d1yq9b_, d1yq9i_
   complexed with f3s, fco, gol, h2s, mg, ni, per, sf4

Details for d1yq9h1

PDB Entry: 1yq9, 2.35 Å

PDB Description: structure of the unready oxidized form of [nife] hydrogenase

PDB Compounds: (H:) Periplasmic [NiFe] hydrogenase Large subunit

SCOPe Domain Sequences for d1yq9h1:

Sequence; same for both SEQRES and ATOM records:

>d1yq9h1 e.18.1.1 (H:7-536) Nickel-iron hydrogenase, large subunit {Desulfovibrio gigas [TaxId: 879]}
nkivvdpitrieghlrieveveggkiknawsmstlfrglemilkgrdprdaqhftqracg
vctyvhalasvravdncvgvkipenatlmrnltmgaqymhdhlvhfyhlhaldwvnvana
lnadpakaarlandlsprkttteslkavqakvkalvesgqlgiftnayflgghpayvlpa
evdliatahylealrvqvkaaramaifgaknphtqftvvggctnydslrperiaefrkly
kevrefieqvyitdllavagfyknwagigktsnfltcgefptdeydlnsrytpqgviwgn
dlskvddfnpdlieehvkyswyegadahhpykgvtkpkwtefhgedryswmkaprykgea
fevgplasvlvayakkheptvkavdlvlktlgvgpealfstlgrtaargiqcltaaqeve
vwldkleanvkagkddlytdwqyptesqgvgfvnaprgmlshwivqrggkienfqlvvps
twnlgprcaegklsaveqaligtpiadpkrpveilrtvhsydpciacgvh

Timeline for d1yq9h1:

• d1yq9h1 first appeared in SCOP 1.75
  
• d1yq9h1 appears in SCOPe 2.06
  
• d1yq9h1 appears in the current release, SCOPe 2.08