Lineage for d1y5nc_ (1y5n C:)

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2226050Fold f.21: Heme-binding four-helical bundle [81344] (3 superfamilies)
    core: four transmembrane helices, up-and-down bundle, binds one or two heme groups in between the helices
  4. 2226268Superfamily f.21.3: Respiratory nitrate reductase 1 gamma chain [103501] (1 family) (S)
    possible link between the two other superfamilies: this subunit corresponds to the gamma subunit of a functionally related Formate dehydrogenase N complex but is structurally closer to the Fumarate reductase subunit FrdC
    automatically mapped to Pfam PF02665
  5. 2226269Family f.21.3.1: Respiratory nitrate reductase 1 gamma chain [103502] (2 protein domains)
  6. 2226270Protein Respiratory nitrate reductase 1 gamma chain [103503] (1 species)
  7. 2226271Species Escherichia coli [TaxId:562] [103504] (6 PDB entries)
    Uniprot P11350
  8. 2226277Domain d1y5nc_: 1y5n C: [144599]
    Other proteins in same PDB: d1y5na1, d1y5na2, d1y5nb_
    automated match to d1q16c_
    complexed with 3ph, 6mo, aga, f3s, hem, md1, pci, sf4; mutant

Details for d1y5nc_

PDB Entry: 1y5n (more details), 2.5 Å

PDB Description: The crystal structure of the NarGHI mutant NarI-K86A in complex with pentachlorophenol
PDB Compounds: (C:) Respiratory nitrate reductase 1 gamma chain

SCOPe Domain Sequences for d1y5nc_:

Sequence, based on SEQRES records: (download)

>d1y5nc_ f.21.3.1 (C:) Respiratory nitrate reductase 1 gamma chain {Escherichia coli [TaxId: 562]}
mqflnmfffdiypyiagavfligswlrydygqytwraassqmldrkgmnlasnlfhigil
gifvghffgmltphwmyeawlpievaqkmamfaggasgvlcliggvlllkrrlfsprvra
tttgadililsllviqcalglltipfsaqhmdgsemmklvgwaqsvvtfhggasqhldgv
afifrlhlvlgmtlfllfpfsrlihiwsvpveyltrkyqlvrarh

Sequence, based on observed residues (ATOM records): (download)

>d1y5nc_ f.21.3.1 (C:) Respiratory nitrate reductase 1 gamma chain {Escherichia coli [TaxId: 562]}
mqflnmfffdiypyiagavfligswlrydygqytwraassqmldrkgmnlasnlfhigil
gifvghffgmltlpievaqkmamfaggasgvlcliggvlllkrrlfsprvratttgadil
ilsllviqcalglltipfsaqhmdgsemmklvgwaqsvvtfhggasqhldgvafifrlhl
vlgmtlfllfpfsrlihiwsvpveyltrkyqlvrarh

SCOPe Domain Coordinates for d1y5nc_:

Click to download the PDB-style file with coordinates for d1y5nc_.
(The format of our PDB-style files is described here.)

Timeline for d1y5nc_: