Lineage for d1vs8n1 (1vs8 N:1-127)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1228415Fold d.188: Prokaryotic ribosomal protein L17 [64262] (1 superfamily)
    alpha-beta-alpha(3)-beta(2); 2 layers: alpha/beta;
  4. 1228416Superfamily d.188.1: Prokaryotic ribosomal protein L17 [64263] (1 family) (S)
    some topological similarity to ribosomal protein L22
  5. 1228417Family d.188.1.1: Prokaryotic ribosomal protein L17 [64264] (1 protein)
  6. 1228418Protein Prokaryotic ribosomal protein L17 [64265] (4 species)
  7. 1228426Species Escherichia coli [TaxId:562] [160270] (27 PDB entries)
    Uniprot P02416 1-127
  8. 1228441Domain d1vs8n1: 1vs8 N:1-127 [144510]
    Other proteins in same PDB: d1vs801, d1vs811, d1vs821, d1vs831, d1vs841, d1vs8c1, d1vs8c2, d1vs8d1, d1vs8e1, d1vs8f1, d1vs8g1, d1vs8g2, d1vs8h1, d1vs8h2, d1vs8i1, d1vs8i2, d1vs8j1, d1vs8k1, d1vs8l1, d1vs8m1, d1vs8o1, d1vs8p1, d1vs8q1, d1vs8r1, d1vs8s1, d1vs8t1, d1vs8u1, d1vs8v1, d1vs8w1, d1vs8x1, d1vs8y1, d1vs8z1
    automatically matched to 2AW4 N:1-127
    complexed with mg

Details for d1vs8n1

PDB Entry: 1vs8 (more details), 3.46 Å

PDB Description: Crystal structure of the bacterial ribosome from escherichia coli in complex with the antibiotic kasugamyin at 3.5a resolution. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes and is described in remark 400.
PDB Compounds: (N:) 50S ribosomal protein L17

SCOPe Domain Sequences for d1vs8n1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vs8n1 d.188.1.1 (N:1-127) Prokaryotic ribosomal protein L17 {Escherichia coli [TaxId: 562]}
mrhrksgrqlnrnsshrqamfrnmagslvrheiikttlpkakelrrvveplitlaktdsv
anrrlafartrdneivaklfnelgprfasraggytrilkcgfragdnapmayielvdrse
kaeaaae

SCOPe Domain Coordinates for d1vs8n1:

Click to download the PDB-style file with coordinates for d1vs8n1.
(The format of our PDB-style files is described here.)

Timeline for d1vs8n1: