SCOPe 2.08: Protein: Ribosome biogenesis protein Nop10

Lineage for Protein: Ribosome biogenesis protein Nop10

Root: SCOPe 2.08
Class g: Small proteins [56992] (100 folds)
Fold g.41: Rubredoxin-like [57769] (17 superfamilies)
metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
Superfamily g.41.16: Nop10-like SnoRNP [144210] (1 family)
automatically mapped to Pfam PF04135

Family g.41.16.1: Nucleolar RNA-binding protein Nop10-like [144211] (3 proteins)
Pfam PF04135; contains N-terminal zinc-finger domain similar to the insert finger of the Initiation factor eIF2 gamma subunit (75204)

Protein Ribosome biogenesis protein Nop10 [144214] (2 species)

Species:

Methanococcus jannaschii [TaxId:2190] [144216] (2 PDB entries)
Uniprot P81303 1-60
1. Domain for 2apo:
  - Domain d2apob_: 2apo B: [127135]
    Other proteins in same PDB: d2apoa1, d2apoa2
    automated match to d2aqca1
    protein/RNA complex; complexed with k, zn
2. Domain for 2aqc:
  - Domain d2aqca1: 2aqc A:1-60 [127177]
    Other proteins in same PDB: d2aqca2
    complexed with zn
Pyrococcus furiosus [TaxId:2261] [144215] (10 PDB entries)
Uniprot Q8U1R4 4-55
1. Domain for 2ey4:
  - Domain d2ey4e1: 2ey4 E:4-55 [132584]
    Other proteins in same PDB: d2ey4a1, d2ey4a2, d2ey4b1, d2ey4b2, d2ey4c1, d2ey4d_, d2ey4f_
    complexed with zn
2. Domain for 2hvy:
  - Domain d2hvyc1: 2hvy C:3-55 [145412]
    Other proteins in same PDB: d2hvya1, d2hvya2, d2hvyb1, d2hvyd1
    protein/RNA complex; complexed with atp, zn
3. Domain for 2rfk:
  - Domain d2rfkb_: 2rfk B: [151998]
    Other proteins in same PDB: d2rfka1, d2rfka2, d2rfkc_
    automated match to d2ey4e1
    protein/RNA complex; complexed with zn
4. Domain for 3hax:
  - Domain d3haxc_: 3hax C: [177353]
    automated match to d2hvyc1
    protein/RNA complex; complexed with edo, mg, pg4, pge, zn
5. Domain for 3hjw:
  - Domain d3hjwb_: 3hjw B: [177619]
    Other proteins in same PDB: d3hjwa1, d3hjwa2
    automated match to d2hvyc1
    protein/RNA complex; complexed with k, zn
6. Domain for 3lwo:
  - Domain d3lwob_: 3lwo B: [180608]
    automated match to d2hvyc1
    protein/RNA complex; complexed with zn
7. Domain for 3lwp:
  - Domain d3lwpb_: 3lwp B: [180609]
    automated match to d2hvyc1
    protein/RNA complex; complexed with zn
8. Domain for 3lwq:
  - Domain d3lwqb_: 3lwq B: [180610]
    automated match to d2hvyc1
    protein/RNA complex; complexed with zn
9. Domain for 3lwr:
  - Domain d3lwrb_: 3lwr B: [180611]
    automated match to d2hvyc1
    protein/RNA complex; complexed with zn
10. Domain for 3mqk:
  - Domain d3mqkb_: 3mqk B: [181493]
    Other proteins in same PDB: d3mqka1, d3mqka2, d3mqkc_
    automated match to d2ey4e1
    protein/RNA complex

More info for Protein Ribosome biogenesis protein Nop10 from g.41.16.1: Nucleolar RNA-binding protein Nop10-like

Timeline for Protein Ribosome biogenesis protein Nop10 from g.41.16.1: Nucleolar RNA-binding protein Nop10-like:

Protein Ribosome biogenesis protein Nop10 from g.41.16.1: Nucleolar RNA-binding protein Nop10-like first appeared in SCOP 1.73
Protein Ribosome biogenesis protein Nop10 from g.41.16.1: Nucleolar RNA-binding protein Nop10-like appears in SCOPe 2.07