Lineage for Protein: Ribonuclease Z (RNase Z)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1937671Fold d.157: Metallo-hydrolase/oxidoreductase [56280] (1 superfamily)
    duplication of beta(4)-alpha-beta-alpha motif; 4 layers a/b/b/a; mixed beta-sheets
  4. 1937672Superfamily d.157.1: Metallo-hydrolase/oxidoreductase [56281] (15 families) (S)
  5. 1937968Family d.157.1.7: RNase Z-like [143916] (1 protein)
    part of Pfam PF00753; tRNA 3'-endonuclease; elaborated with additional structures and insert alpha(2)-beta(2) subdomain
  6. 1937969Protein Ribonuclease Z (RNase Z) [143917] (3 species)

Species:

  1. 1937970Bacillus subtilis [TaxId:1423] [143918] (2 PDB entries)
    Uniprot P54548 1-307
    1. Domains for 1y44:
      1. 1937971Domain d1y44a1: 1y44 A:1-307 [122608]
        complexed with gol, mes, po4, zn
      2. 1937972Domain d1y44b_: 1y44 B: [122609]
        automated match to d1y44a1
        complexed with gol, mes, po4, zn
    2. Domain for 2fk6:
  2. 1937974Escherichia coli [TaxId:562] [143919] (1 PDB entry)
    Uniprot P0A8V0 1-305
  3. 1937976Thermotoga maritima [TaxId:2336] [143920] (2 PDB entries)
    Uniprot Q9WZW8 1-280
    1. Domains for 1ww1:
      1. 1937979Domain d1ww1a1: 1ww1 A:1-280 [121348]
        insert subdomain is disordered in this structure
        complexed with zn
      2. 1937980Domain d1ww1b_: 1ww1 B: [121349]
        automated match to d1ww1a1
        complexed with zn
    2. Domains for 2e7y:
      1. 1937977Domain d2e7ya_: 2e7y A: [146706]
        automated match to d1ww1a1
        complexed with pgo, so4, zn
      2. 1937978Domain d2e7yb_: 2e7y B: [146707]
        automated match to d1ww1a1
        complexed with pgo, so4, zn

More info for Protein Ribonuclease Z (RNase Z) from d.157.1.7: RNase Z-like

Timeline for Protein Ribonuclease Z (RNase Z) from d.157.1.7: RNase Z-like: