Lineage for Protein: Ribosomal protein L28 (L28p)

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 882544Fold d.325: L28p-like [143799] (1 superfamily)
    unusual fold consisting of three beta-hairpins, that form a paper clip-like structure, and two helices; could have evolved from a glucocorticoid receptor-like zinc finger domain ((57715))
    unusual fold consisting of three beta-hairpins, that form a paper clip-like structure, and two helices; could have evolved from a glucocorticoid receptor-like zinc finger domain ((57715))
  4. 882545Superfamily d.325.1: L28p-like [143800] (2 families) (S)
    In early ribosomal structures, L28p has been misinterpreted as L31p. in the Ribosomal protein L28p family, there are sequences containing two CxxC pairs. Threading these sequences into this fold brings the four cysteines in a similar site to the zinc-binding site of glucocorticoid receptor-like zinc fingers. In the Ribosomal protein L31p, there are also members with two CxxC pairs. However, these won't form a putative zinc-binding site in this fold. The L31p family are classified here temporarily, until its true fold is known
  5. 882546Family d.325.1.1: Ribosomal protein L28 [143801] (1 protein)
  6. 882547Protein Ribosomal protein L28 (L28p) [143802] (4 species)

Species:

  1. 882548Deinococcus radiodurans [TaxId:1299] [160708] (5 PDB entries)
    Uniprot Q9RRG8 8-79
    1. Domain for 2zjp:
    2. Domain for 2zjq:
    3. Domain for 2zjr:
    4. Domain for 3cf5:
    5. Domain for 3dll:
  2. 882554Escherichia coli [TaxId:562] [160709] (18 PDB entries)
    Uniprot P0A7M2 1-77
    1. Domain for 2i2t:
    2. Domain for 2i2v:
    3. Domain for 2qam:
    4. Domain for 2qao:
    5. Domain for 2qba:
    6. Domain for 2qbc:
    7. Domain for 2qbe:
    8. Domain for 2qbg:
    9. Domain for 2qbi:
    10. Domain for 2qbk:
    11. Domain for 2qov:
    12. Domain for 2qox:
    13. Domain for 2qoz:
    14. Domain for 2qp1:
    15. Domain for 2z4l:
    16. Domain for 2z4n:
    17. Domain for 3df2:
    18. Domain for 3df4:
  3. 882573Thermotoga maritima [TaxId:2336] [160710] (1 PDB entry)
    Uniprot Q9WY96 1-70
    • Domain for 2jz6:
      • 882574Domain d2jz6a1: 2jz6 A:6-75 [148245]
        solution structure with the ordered "GATA-like zinc finger" core
  4. 882575Thermus thermophilus [TaxId:274] [143803] (2 PDB entries)
    Uniprot P60494 7-95
    1. Domain for 2j01:
    2. Domain for 2j03:

More info for Protein Ribosomal protein L28 (L28p) from d.325.1.1: Ribosomal protein L28

Timeline for Protein Ribosomal protein L28 (L28p) from d.325.1.1: Ribosomal protein L28: