SCOPe 2.07: Species: Pyrococcus horikoshii [TaxId: 53953]

Lineage for Species: Pyrococcus horikoshii [TaxId: 53953]

Root: SCOPe 2.07
Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
contains large mixed beta-sheet
Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)
Family d.104.1.2: Biotin holoenzyme synthetase [55707] (3 proteins)
Protein Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain [143640] (1 species)
Species Pyrococcus horikoshii [TaxId:53953] [143641] (27 PDB entries)
Uniprot O57883 1-188

PDB entries in Species: Pyrococcus horikoshii [TaxId: 53953]:

Domain(s) for 1wnl:
1. Domain d1wnla2: 1wnl A:1-188 [121095]
  Other proteins in same PDB: d1wnla1, d1wnlb1
  complexed with adp, gol
2. Domain d1wnlb2: 1wnl B:1-188 [121097]
  Other proteins in same PDB: d1wnla1, d1wnlb1
  automated match to d1wnla2
  complexed with adp, gol
Domain(s) for 1wpy:
1. Domain d1wpya2: 1wpy A:1-188 [121158]
  Other proteins in same PDB: d1wpya1, d1wpyb1
  automated match to d1wnla2
  complexed with btn
2. Domain d1wpyb2: 1wpy B:1-188 [121160]
  Other proteins in same PDB: d1wpya1, d1wpyb1
  automated match to d1wnla2
  complexed with btn
Domain(s) for 1wq7:
1. Domain d1wq7a2: 1wq7 A:1-188 [121166]
  Other proteins in same PDB: d1wq7a1, d1wq7b1
  automated match to d1wnla2
2. Domain d1wq7b2: 1wq7 B:1-188 [121168]
  Other proteins in same PDB: d1wq7a1, d1wq7b1
  automated match to d1wnla2
Domain(s) for 1wqw:
1. Domain d1wqwa2: 1wqw A:1-188 [121180]
  Other proteins in same PDB: d1wqwa1, d1wqwb1
  automated match to d1wnla2
  complexed with bt5
2. Domain d1wqwb2: 1wqw B:1-188 [121182]
  Other proteins in same PDB: d1wqwa1, d1wqwb1
  automated match to d1wnla2
  complexed with bt5
Domain(s) for 1x01:
1. Domain d1x01a2: 1x01 A:1-188 [121538]
  Other proteins in same PDB: d1x01a1, d1x01b1
  automated match to d1wnla2
  complexed with acy, atp, po4
2. Domain d1x01b2: 1x01 B:1-188 [121540]
  Other proteins in same PDB: d1x01a1, d1x01b1
  automated match to d1wnla2
  complexed with acy, atp, po4
Domain(s) for 2deq:
1. Domain d2deqa1: 2deq A:1-188 [230648]
  Other proteins in same PDB: d2deqa2, d2deqb2
  automated match to d1wnla2
  complexed with bt5; mutant
2. Domain d2deqb1: 2deq B:1-188 [230649]
  Other proteins in same PDB: d2deqa2, d2deqb2
  automated match to d1wnla2
  complexed with bt5; mutant
Domain(s) for 2djz:
1. Domain d2djza1: 2djz A:1-188 [230650]
  Other proteins in same PDB: d2djza2, d2djzb2
  automated match to d1wnla2
  complexed with bt5; mutant
2. Domain d2djzb1: 2djz B:1-188 [230651]
  Other proteins in same PDB: d2djza2, d2djzb2
  automated match to d1wnla2
  complexed with bt5; mutant
Domain(s) for 2dkg:
1. Domain d2dkga2: 2dkg A:1-188 [131552]
  Other proteins in same PDB: d2dkga1, d2dkgb1
  automated match to d1wnla2
  complexed with bt5, mg, pop
2. Domain d2dkgb2: 2dkg B:1-188 [131554]
  Other proteins in same PDB: d2dkga1, d2dkgb1
  automated match to d1wnla2
  complexed with bt5, mg, pop
Domain(s) for 2dth:
1. Domain d2dtha2: 2dth A:1-188 [131714]
  Other proteins in same PDB: d2dtha1, d2dthb1
  automated match to d1wnla2
  complexed with adp, btn
2. Domain d2dthb2: 2dth B:1-188 [131716]
  Other proteins in same PDB: d2dtha1, d2dthb1
  automated match to d1wnla2
  complexed with adp, btn
Domain(s) for 2dti:
1. Domain d2dtia2: 2dti A:1-188 [131718]
  Other proteins in same PDB: d2dtia1, d2dtib1
  automated match to d1wnla2
  complexed with bt5, mn, pop
2. Domain d2dtib2: 2dti B:1-188 [131720]
  Other proteins in same PDB: d2dtia1, d2dtib1
  automated match to d1wnla2
  complexed with bt5, mn, pop
Domain(s) for 2dto:
1. Domain d2dtoa2: 2dto A:1-188 [131722]
  Other proteins in same PDB: d2dtoa1, d2dtob1
  automated match to d1wnla2
  complexed with atp, btn
2. Domain d2dtob2: 2dto B:1-188 [131724]
  Other proteins in same PDB: d2dtoa1, d2dtob1
  automated match to d1wnla2
  complexed with atp, btn
Domain(s) for 2dve:
1. Domain d2dvea1: 2dve A:1-188 [230658]
  Other proteins in same PDB: d2dvea2, d2dveb2
  automated match to d1wnla2
  complexed with bt5; mutant
2. Domain d2dveb1: 2dve B:1-188 [230659]
  Other proteins in same PDB: d2dvea2, d2dveb2
  automated match to d1wnla2
  complexed with bt5; mutant
Domain(s) for 2dxt:
1. Domain d2dxta1: 2dxt A:1-188 [230670]
  Other proteins in same PDB: d2dxta2, d2dxtb2
  automated match to d1wnla2
  complexed with atp, btn; mutant
2. Domain d2dxtb1: 2dxt B:1-188 [230672]
  Other proteins in same PDB: d2dxta2, d2dxtb2
  automated match to d1wnla2
  complexed with atp, btn; mutant
Domain(s) for 2dxu:
1. Domain d2dxua1: 2dxu A:1-188 [230674]
  Other proteins in same PDB: d2dxua2, d2dxub2
  automated match to d1wnla2
  complexed with bt5; mutant
2. Domain d2dxub1: 2dxu B:1-188 [230676]
  Other proteins in same PDB: d2dxua2, d2dxub2
  automated match to d1wnla2
  complexed with bt5; mutant
Domain(s) for 2dz9:
1. Domain d2dz9a1: 2dz9 A:1-188 [241657]
  Other proteins in same PDB: d2dz9a2, d2dz9b2
  automated match to d2dxta1
  complexed with bt5; mutant
2. Domain d2dz9b1: 2dz9 B:1-188 [241659]
  Other proteins in same PDB: d2dz9a2, d2dz9b2
  automated match to d2dxta1
  complexed with bt5; mutant
Domain(s) for 2dzc:
1. Domain d2dzca1: 2dzc A:1-188 [241661]
  Other proteins in same PDB: d2dzca2, d2dzcb2
  automated match to d2dxua1
  mutant
2. Domain d2dzcb1: 2dzc B:1-188 [241663]
  Other proteins in same PDB: d2dzca2, d2dzcb2
  automated match to d2dxua1
  mutant
Domain(s) for 2e10:
1. Domain d2e10a1: 2e10 A:1-188 [241674]
  Other proteins in same PDB: d2e10a2, d2e10b2
  automated match to d2dvea1
  mutant
2. Domain d2e10b1: 2e10 B:1-188 [241676]
  Other proteins in same PDB: d2e10a2, d2e10b2
  automated match to d2dvea1
  mutant
Domain(s) for 2e1h:
1. Domain d2e1ha1: 2e1h A:1-188 [241678]
  Other proteins in same PDB: d2e1ha2, d2e1hb2
  automated match to d2deqa1
  mutant
2. Domain d2e1hb1: 2e1h B:1-188 [241680]
  Other proteins in same PDB: d2e1ha2, d2e1hb2
  automated match to d2deqa1
  mutant
Domain(s) for 2e3y:
1. Domain d2e3ya1: 2e3y A:1-188 [303753]
  Other proteins in same PDB: d2e3ya2, d2e3yb2
  automated match to d2zgwa2
  complexed with adn, btn; mutant
2. Domain d2e3yb1: 2e3y B:1-188 [303755]
  Other proteins in same PDB: d2e3ya2, d2e3yb2
  automated match to d2zgwa2
  complexed with adn, btn; mutant
Domain(s) for 2e41:
1. Domain d2e41a2: 2e41 A:1-188 [146680]
  Other proteins in same PDB: d2e41a1, d2e41b1
  automated match to d2zgwa2
  complexed with btx; mutant
2. Domain d2e41b2: 2e41 B:1-188 [146682]
  Other proteins in same PDB: d2e41a1, d2e41b1
  automated match to d2zgwa2
  complexed with btx; mutant
Domain(s) for 2e64:
1. Domain d2e64a2: 2e64 A:1-188 [146698]
  Other proteins in same PDB: d2e64a1, d2e64b1
  automated match to d2zgwa2
  mutant
2. Domain d2e64b2: 2e64 B:1-188 [146700]
  Other proteins in same PDB: d2e64a1, d2e64b1
  automated match to d2zgwa2
  mutant
Domain(s) for 2e65:
1. Domain d2e65a1: 2e65 A:1-188 [241690]
  Other proteins in same PDB: d2e65a2, d2e65b2
  automated match to d2dxta1
  mutant
2. Domain d2e65b1: 2e65 B:1-188 [241692]
  Other proteins in same PDB: d2e65a2, d2e65b2
  automated match to d2dxta1
  mutant
Domain(s) for 2ejf:
1. Domain d2ejfa2: 2ejf A:1-188 [146872]
  Other proteins in same PDB: d2ejfa1, d2ejfb1
  automated match to d2zgwa2
  complexed with adn, btn, gol; mutant
2. Domain d2ejfb2: 2ejf B:1-188 [146874]
  Other proteins in same PDB: d2ejfa1, d2ejfb1
  automated match to d2zgwa2
  complexed with adn, btn, gol; mutant
Domain(s) for 2ejg:
1. Domain d2ejga1: 2ejg A:1-188 [241768]
  Other proteins in same PDB: d2ejga2, d2ejgb2
  automated match to d2dxua1
  complexed with adn, btn; mutant
2. Domain d2ejgb1: 2ejg B:1-188 [241770]
  Other proteins in same PDB: d2ejga2, d2ejgb2
  automated match to d2dxua1
  complexed with adn, btn; mutant
Domain(s) for 2fyk:
1. Domain d2fyka2: 2fyk A:1-188 [134375]
  Other proteins in same PDB: d2fyka1, d2fykb1
  automated match to d1wnla2
  complexed with adp, btn
2. Domain d2fykb2: 2fyk B:1-188 [134377]
  Other proteins in same PDB: d2fyka1, d2fykb1
  automated match to d1wnla2
  complexed with adp, btn
Domain(s) for 2hni:
1. Domain d2hnia1: 2hni A:1-188 [242046]
  Other proteins in same PDB: d2hnia2, d2hnib2
  automated match to d2djza1
  complexed with acy; mutant
2. Domain d2hnib1: 2hni B:1-188 [242048]
  Other proteins in same PDB: d2hnia2, d2hnib2
  automated match to d2djza1
  complexed with acy; mutant
Domain(s) for 2zgw:
1. Domain d2zgwa2: 2zgw A:1-188 [154422]
  Other proteins in same PDB: d2zgwa1, d2zgwb1
  complexed with adn, btn; mutant
2. Domain d2zgwb2: 2zgw B:1-188 [154424]
  Other proteins in same PDB: d2zgwa1, d2zgwb1
  automated match to d2zgwa2
  complexed with adn, btn; mutant

More info for Species Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain

Timeline for Species Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain:

Species Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain first appeared in SCOP 1.73, called Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain
Species Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain appears in SCOPe 2.06
Species Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain appears in the current release, SCOPe 2.08