Lineage for Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 730671Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
    contains large mixed beta-sheet
  4. 730672Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (3 families) (S)
  5. 730883Family d.104.1.2: Biotin holoenzyme synthetase [55707] (2 proteins)
  6. 730892Protein Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain [143640] (1 species)
  7. 730893Species Archaeon Pyrococcus horikoshii [TaxId:53953] [143641] (10 PDB entries)

PDB entries in Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 1wnl:
    1. 730898Domain d1wnla2: 1wnl A:1-188 [121095]
      Other proteins in same PDB: d1wnla1, d1wnlb1
      complexed with adp, gol
    2. 730899Domain d1wnlb2: 1wnl B:1-188 [121097]
      Other proteins in same PDB: d1wnla1, d1wnlb1
      automatically matched to 1WNL A:1-188
      complexed with adp, gol
  2. Domain(s) for 1wpy:
    1. 730900Domain d1wpya2: 1wpy A:1-188 [121158]
      Other proteins in same PDB: d1wpya1, d1wpyb1
      automatically matched to 1WNL A:1-188
      complexed with btn
    2. 730901Domain d1wpyb2: 1wpy B:1-188 [121160]
      Other proteins in same PDB: d1wpya1, d1wpyb1
      automatically matched to 1WNL A:1-188
      complexed with btn
  3. Domain(s) for 1wq7:
    1. 730904Domain d1wq7a2: 1wq7 A:1-188 [121166]
      Other proteins in same PDB: d1wq7a1, d1wq7b1
      automatically matched to 1WNL A:1-188
    2. 730905Domain d1wq7b2: 1wq7 B:1-188 [121168]
      Other proteins in same PDB: d1wq7a1, d1wq7b1
      automatically matched to 1WNL A:1-188
  4. Domain(s) for 1wqw:
    1. 730894Domain d1wqwa2: 1wqw A:1-188 [121180]
      Other proteins in same PDB: d1wqwa1, d1wqwb1
      automatically matched to 1WNL A:1-188
      complexed with bt5
    2. 730895Domain d1wqwb2: 1wqw B:1-188 [121182]
      Other proteins in same PDB: d1wqwa1, d1wqwb1
      automatically matched to 1WNL A:1-188
      complexed with bt5
  5. Domain(s) for 1x01:
    1. 730906Domain d1x01a2: 1x01 A:1-188 [121538]
      Other proteins in same PDB: d1x01a1, d1x01b1
      automatically matched to 1WNL A:1-188
      complexed with acy, atp, po4
    2. 730907Domain d1x01b2: 1x01 B:1-188 [121540]
      Other proteins in same PDB: d1x01a1, d1x01b1
      automatically matched to 1WNL A:1-188
      complexed with acy, atp, po4
  6. Domain(s) for 2dkg:
    1. 730908Domain d2dkga2: 2dkg A:1-188 [131552]
      Other proteins in same PDB: d2dkga1, d2dkgb1
      automatically matched to 1WNL A:1-188
      complexed with bt5, mg, pop
    2. 730909Domain d2dkgb2: 2dkg B:1-188 [131554]
      Other proteins in same PDB: d2dkga1, d2dkgb1
      automatically matched to 1WNL A:1-188
      complexed with bt5, mg, pop
  7. Domain(s) for 2dth:
    1. 730910Domain d2dtha2: 2dth A:1-188 [131714]
      Other proteins in same PDB: d2dtha1, d2dthb1
      automatically matched to 1WNL A:1-188
      complexed with adp, btn
    2. 730911Domain d2dthb2: 2dth B:1-188 [131716]
      Other proteins in same PDB: d2dtha1, d2dthb1
      automatically matched to 1WNL A:1-188
      complexed with adp, btn
  8. Domain(s) for 2dti:
    1. 730912Domain d2dtia2: 2dti A:1-188 [131718]
      Other proteins in same PDB: d2dtia1, d2dtib1
      automatically matched to 1WNL A:1-188
      complexed with bt5, mn, pop
    2. 730913Domain d2dtib2: 2dti B:1-188 [131720]
      Other proteins in same PDB: d2dtia1, d2dtib1
      automatically matched to 1WNL A:1-188
      complexed with bt5, mn, pop
  9. Domain(s) for 2dto:
    1. 730896Domain d2dtoa2: 2dto A:1-188 [131722]
      Other proteins in same PDB: d2dtoa1, d2dtob1
      automatically matched to 1WNL A:1-188
      complexed with atp, btn
    2. 730897Domain d2dtob2: 2dto B:1-188 [131724]
      Other proteins in same PDB: d2dtoa1, d2dtob1
      automatically matched to 1WNL A:1-188
      complexed with atp, btn
  10. Domain(s) for 2fyk:
    1. 730902Domain d2fyka2: 2fyk A:1-188 [134375]
      Other proteins in same PDB: d2fyka1, d2fykb1
      automatically matched to 1WNL A:1-188
      complexed with adp, btn
    2. 730903Domain d2fykb2: 2fyk B:1-188 [134377]
      Other proteins in same PDB: d2fyka1, d2fykb1
      automatically matched to 1WNL A:1-188
      complexed with adp, btn

More info for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain

Timeline for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain:

  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain is new in SCOP 1.73
  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain appears in SCOP 1.75
  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain appears in the current release, SCOPe 2.07, called Species Pyrococcus horikoshii [TaxId:53953] from d.104.1.2 Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain