Lineage for Species: SARS coronavirus [TaxId: 227859]

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3010708Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
    core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542
  4. 3010709Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family) (S)
    automatically mapped to Pfam PF09408
  5. 3010710Family d.318.1.1: SARS receptor-binding domain-like [143588] (2 proteins)
    part of PfamB PB000266
  6. 3010711Protein Spike protein S1 [143589] (5 species)
  7. 3010719Species SARS coronavirus [TaxId:227859] [143590] (14 PDB entries)
    Uniprot P59594 320-502! Uniprot P59594 321-512! Uniprot P59594 323-502

PDB entries in Species: SARS coronavirus [TaxId: 227859]:

  1. Domain(s) for 2ajf:
    1. 3010738Domain d2ajfe1: 2ajf E:323-502 [126884]
      Other proteins in same PDB: d2ajfa_, d2ajfb_
      complexed with cl, nag, zn
    2. 3010739Domain d2ajff_: 2ajf F: [126885]
      Other proteins in same PDB: d2ajfa_, d2ajfb_
      automated match to d2dd8s1
      complexed with cl, nag, zn
  2. Domain(s) for 2dd8:
  3. Domain(s) for 2ghv:
    1. 3010720Domain d2ghvc1: 2ghv C:320-502 [135214]
    2. 3010721Domain d2ghve_: 2ghv E: [135215]
      automated match to d2dd8s1
  4. Domain(s) for 2ghw:
    1. 3010725Domain d2ghwa_: 2ghw A: [135216]
      Other proteins in same PDB: d2ghwb1, d2ghwb2, d2ghwd1, d2ghwd2, d2ghwd3
      automated match to d2dd8s1
      complexed with cl
    2. 3010726Domain d2ghwc_: 2ghw C: [135217]
      Other proteins in same PDB: d2ghwb1, d2ghwb2, d2ghwd1, d2ghwd2, d2ghwd3
      automated match to d2dd8s1
      complexed with cl
  5. Domain(s) for 3bgf:
    1. 3010728Domain d3bgfa_: 3bgf A: [245370]
      Other proteins in same PDB: d3bgfb_, d3bgfc1, d3bgfc2, d3bgfh_, d3bgfl1, d3bgfl2
      automated match to d2ghwa_
    2. 3010729Domain d3bgfs_: 3bgf S: [245375]
      Other proteins in same PDB: d3bgfb_, d3bgfc1, d3bgfc2, d3bgfh_, d3bgfl1, d3bgfl2
      automated match to d2ghwa_
  6. Domain(s) for 3d0g:
    1. 3010732Domain d3d0ge_: 3d0g E: [157170]
      Other proteins in same PDB: d3d0ga_, d3d0gb_
      automated match to d2ajfe1
      complexed with cl, nag, ndg, zn
    2. 3010733Domain d3d0gf_: 3d0g F: [157171]
      Other proteins in same PDB: d3d0ga_, d3d0gb_
      automated match to d2ajfe1
      complexed with cl, nag, ndg, zn
  7. Domain(s) for 3d0h:
    1. 3010740Domain d3d0he_: 3d0h E: [245599]
      Other proteins in same PDB: d3d0ha_, d3d0hb_
      automated match to d2ghwa_
      complexed with cl, nag, ndg, zn
    2. 3010741Domain d3d0hf_: 3d0h F: [245600]
      Other proteins in same PDB: d3d0ha_, d3d0hb_
      automated match to d2ghwa_
      complexed with cl, nag, ndg, zn
  8. Domain(s) for 3d0i:
    1. 3010730Domain d3d0ie_: 3d0i E: [173602]
      Other proteins in same PDB: d3d0ia_, d3d0ib_
      automated match to d2ajfe1
      complexed with cl, nag, ndg, zn
    2. 3010731Domain d3d0if_: 3d0i F: [173603]
      Other proteins in same PDB: d3d0ia_, d3d0ib_
      automated match to d2ajfe1
      complexed with cl, nag, ndg, zn
  9. Domain(s) for 3sci:
    1. 3010734Domain d3scie_: 3sci E: [239714]
      Other proteins in same PDB: d3scia_, d3scib_
      automated match to d2dd8s1
      complexed with cl, zn
    2. 3010735Domain d3scif_: 3sci F: [239715]
      Other proteins in same PDB: d3scia_, d3scib_
      automated match to d2dd8s1
      complexed with cl, zn
  10. Domain(s) for 3scj:
    1. 3010736Domain d3scje_: 3scj E: [249345]
      Other proteins in same PDB: d3scja_, d3scjb_
      automated match to d2ghwc_
      complexed with cl, zn
    2. 3010737Domain d3scjf_: 3scj F: [249346]
      Other proteins in same PDB: d3scja_, d3scjb_
      automated match to d2ghwc_
      complexed with cl, zn
  11. Domain(s) for 3sck:
    1. 3010744Domain d3scke_: 3sck E: [249349]
      Other proteins in same PDB: d3scka_, d3sckb_
      automated match to d3d0ie_
      complexed with cl, zn
    2. 3010745Domain d3sckf_: 3sck F: [249350]
      Other proteins in same PDB: d3scka_, d3sckb_
      automated match to d3d0ie_
      complexed with cl, zn
  12. Domain(s) for 3scl:
    1. 3010742Domain d3scle_: 3scl E: [249353]
      Other proteins in same PDB: d3scla_, d3sclb_
      automated match to d2ghwa_
      complexed with cl, zn
    2. 3010743Domain d3sclf_: 3scl F: [249354]
      Other proteins in same PDB: d3scla_, d3sclb_
      automated match to d2ghwa_
      complexed with cl, zn
  13. Domain(s) for 6waq:
    1. 3010722Domain d6waqb1: 6waq B:321-502 [383251]
      Other proteins in same PDB: d6waqa1, d6waqa2, d6waqb2, d6waqc1, d6waqc2, d6waqd2
      automated match to d2ghwa_
      complexed with nag
    2. 3010723Domain d6waqd1: 6waq D:320-502 [383267]
      Other proteins in same PDB: d6waqa1, d6waqa2, d6waqb2, d6waqc1, d6waqc2, d6waqd2
      automated match to d2ghwa_
      complexed with nag
  14. Domain(s) for 7jn5:

More info for Species SARS coronavirus [TaxId:227859] from d.318.1.1 Spike protein S1

Timeline for Species SARS coronavirus [TaxId:227859] from d.318.1.1 Spike protein S1: