Lineage for Protein: Coronavirus nucleocapsid protein

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2614712Fold d.254: Nucleocapsid protein dimerization domain [103067] (1 superfamily)
    dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta
  4. 2614713Superfamily d.254.1: Nucleocapsid protein dimerization domain [103068] (3 families) (S)
  5. 2614724Family d.254.1.2: Coronavirus nucleocapsid protein [143508] (2 proteins)
    C-terminal part of Pfam PF00937
  6. 2614725Protein Coronavirus nucleocapsid protein [143509] (2 species)

Species:

  1. 2614726Avian infectious bronchitis virus [TaxId:11120] [143510] (3 PDB entries)
    Uniprot P32923 222-333! Uniprot P32923 226-332! Uniprot Q4ZJS4 218-326
    different strains
    1. Domains for 2ca1:
      1. 2614737Domain d2ca1a1: 2ca1 A:218-326 [130147]
      2. 2614738Domain d2ca1b_: 2ca1 B: [130148]
        automated match to d2ca1a1
    2. Domains for 2ge7:
      1. 2614735Domain d2ge7a1: 2ge7 A:8-114 [135049]
        protein/RNA complex
      2. 2614736Domain d2ge7b_: 2ge7 B: [135050]
        automated match to d2ge8a1
        protein/RNA complex
    3. Domains for 2ge8:
      1. 2614727Domain d2ge8a1: 2ge8 A:4-115 [135051]
        protein/RNA complex
      2. 2614728Domain d2ge8b_: 2ge8 B: [135052]
        automated match to d2ge8a1
        protein/RNA complex
      3. 2614729Domain d2ge8c_: 2ge8 C: [135053]
        automated match to d2ge8a1
        protein/RNA complex
      4. 2614730Domain d2ge8d_: 2ge8 D: [135054]
        automated match to d2ge8a1
        protein/RNA complex
      5. 2614731Domain d2ge8f_: 2ge8 F: [135055]
        automated match to d2ge8a1
        protein/RNA complex
      6. 2614732Domain d2ge8g_: 2ge8 G: [135056]
        automated match to d2ge8a1
        protein/RNA complex
      7. 2614733Domain d2ge8i_: 2ge8 I: [135057]
        automated match to d2ge8a1
        protein/RNA complex
      8. 2614734Domain d2ge8j_: 2ge8 J: [135058]
        automated match to d2ge8a1
        protein/RNA complex
  2. 2614739SARS coronavirus [TaxId:227859] [143511] (2 PDB entries)
    Uniprot P59595 270-366
    1. Domain for 2cjr:
    2. Domains for 2gib:
      1. 2614740Domain d2giba1: 2gib A:270-366 [135225]
        complexed with so4
      2. 2614741Domain d2gibb_: 2gib B: [135226]
        automated match to d2giba1
        complexed with so4

More info for Protein Coronavirus nucleocapsid protein from d.254.1.2: Coronavirus nucleocapsid protein

Timeline for Protein Coronavirus nucleocapsid protein from d.254.1.2: Coronavirus nucleocapsid protein: