SCOP 1.75: Protein: Coronavirus nucleocapsid protein

Lineage for Protein: Coronavirus nucleocapsid protein

Root: SCOP 1.75
Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
Fold d.254: Nucleocapsid protein dimerization domain [103067] (1 superfamily)
dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta
Superfamily d.254.1: Nucleocapsid protein dimerization domain [103068] (2 families)
Family d.254.1.2: Coronavirus nucleocapsid protein [143508] (1 protein)
C-terminal part of Pfam PF00937
Protein Coronavirus nucleocapsid protein [143509] (2 species)

Species:

Avian infectious bronchitis virus [TaxId:11120] [143510] (3 PDB entries)
Uniprot P32923 222-333! Uniprot P32923 226-332! Uniprot Q4ZJS4 218-326
different strains
1. Domains for 2ca1:
  1. Domain d2ca1a1: 2ca1 A:218-326 [130147]
  2. Domain d2ca1b1: 2ca1 B:225-326 [130148]
    automatically matched to 2CA1 A:218-326
2. Domains for 2ge7:
  1. Domain d2ge7a1: 2ge7 A:8-114 [135049]
  2. Domain d2ge7b1: 2ge7 B:8-114 [135050]
    automatically matched to 2GE7 A:8-114
3. Domains for 2ge8:
  1. Domain d2ge8a1: 2ge8 A:4-115 [135051]
  2. Domain d2ge8b1: 2ge8 B:7-115 [135052]
    automatically matched to 2GE8 A:4-115
  3. Domain d2ge8c1: 2ge8 C:7-115 [135053]
    automatically matched to 2GE8 A:4-115
  4. Domain d2ge8d1: 2ge8 D:5-115 [135054]
    automatically matched to 2GE8 A:4-115
  5. Domain d2ge8f1: 2ge8 F:8-113 [135055]
    automatically matched to 2GE8 A:4-115
  6. Domain d2ge8g1: 2ge8 G:4-114 [135056]
    automatically matched to 2GE8 A:4-115
  7. Domain d2ge8i1: 2ge8 I:7-113 [135057]
    automatically matched to 2GE8 A:4-115
  8. Domain d2ge8j1: 2ge8 J:8-115 [135058]
    automatically matched to 2GE8 A:4-115
SARS coronavirus [TaxId:227859] [143511] (3 PDB entries)
Uniprot P59595 270-366
1. Domains for 2cjr:
  1. Domain d2cjra1: 2cjr A:251-365 [146399]
  2. Domain d2cjrb1: 2cjr B:253-365 [146400]
    automatically matched to 2CJR A:251-365
  3. Domain d2cjrc1: 2cjr C:253-365 [146401]
    automatically matched to 2CJR A:251-365
  4. Domain d2cjrd1: 2cjr D:251-365 [146402]
    automatically matched to 2CJR A:251-365
  5. Domain d2cjre1: 2cjr E:256-365 [146403]
    automatically matched to 2CJR A:251-365
  6. Domain d2cjrf1: 2cjr F:252-363 [146404]
    automatically matched to 2CJR A:251-365
  7. Domain d2cjrg1: 2cjr G:255-363 [146405]
    automatically matched to 2CJR A:251-365
  8. Domain d2cjrh1: 2cjr H:256-365 [146406]
    automatically matched to 2CJR A:251-365
2. Domains for 2gib:
  1. Domain d2giba1: 2gib A:270-366 [135225]
    complexed with so4
  2. Domain d2gibb1: 2gib B:274-366 [135226]
    automatically matched to 2GIB A:270-366
    complexed with so4
3. Domains for 2jw8:
  1. Domain d2jw8a1: 2jw8 A:251-365 [148226]
    automatically matched to 2CJR A:251-365
  2. Domain d2jw8b1: 2jw8 B:251-365 [148227]
    automatically matched to 2CJR A:251-365

More info for Protein Coronavirus nucleocapsid protein from d.254.1.2: Coronavirus nucleocapsid protein

Timeline for Protein Coronavirus nucleocapsid protein from d.254.1.2: Coronavirus nucleocapsid protein:

Protein Coronavirus nucleocapsid protein from d.254.1.2: Coronavirus nucleocapsid protein first appeared in SCOP 1.73
Protein Coronavirus nucleocapsid protein from d.254.1.2: Coronavirus nucleocapsid protein appears in SCOPe 2.01
Protein Coronavirus nucleocapsid protein from d.254.1.2: Coronavirus nucleocapsid protein appears in the current release, SCOPe 2.08