SCOPe 2.05: Family d.254.1.2: Coronavirus nucleocapsid protein

Lineage for Family d.254.1.2: Coronavirus nucleocapsid protein

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.254: Nucleocapsid protein dimerization domain [103067] (1 superfamily)
   dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta

4. Superfamily d.254.1: Nucleocapsid protein dimerization domain [103068] (2 families)

5. Family d.254.1.2: Coronavirus nucleocapsid protein [143508] (2 proteins)
   C-terminal part of Pfam PF00937

Proteins:

1. Coronavirus nucleocapsid protein [143509] (2 species)

   1. Species Avian infectious bronchitis virus [TaxId:11120] [143510] (3 PDB entries)
      Uniprot P32923 222-333! Uniprot P32923 226-332! Uniprot Q4ZJS4 218-326
      different strains

   2. Species SARS coronavirus [TaxId:227859] [143511] (2 PDB entries)
      Uniprot P59595 270-366

2. automated matches [190565] (2 species)
   not a true protein

   1. Species Human sars coronavirus [TaxId:227859] [255302] (1 PDB entry)

   2. Species Sars coronavirus [TaxId:229993] [187553] (1 PDB entry)

More info for Family d.254.1.2: Coronavirus nucleocapsid protein

Timeline for Family d.254.1.2: Coronavirus nucleocapsid protein:

• Family d.254.1.2: Coronavirus nucleocapsid protein first appeared in SCOP 1.73
  
• Family d.254.1.2: Coronavirus nucleocapsid protein appears in SCOPe 2.04
  
• Family d.254.1.2: Coronavirus nucleocapsid protein appears in SCOPe 2.06
  
• Family d.254.1.2: Coronavirus nucleocapsid protein appears in the current release, SCOPe 2.08