Lineage for Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
- Root: SCOP 1.73
Class d: Alpha and beta proteins (a+b) [53931] (334 folds) 
Fold d.308: THUMP domain [143436] (1 superfamily)
contains mixed 8-stranded beta-sheet, folded into a half-barrel and covered with 4 helices on the outside; order 32148756; strands 5, 6 and 7 are parallelSuperfamily d.308.1: THUMP domain-like [143437] (2 families) 
predicted RNA-binding function
Family d.308.1.1: THUMP domain [143438] (2 proteins)
Pfam PF02926Protein Hypothetical protein PH1313, N-terminal domain [143441] (1 species) Species Archaeon Pyrococcus horikoshii [TaxId:53953] [143442] (1 PDB entry)
PDB entry in Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]:
- Domain(s) for 1vbk:
Domain d1vbka2: 1vbk A:1-175 [119958]
Other proteins in same PDB: d1vbka1, d1vbkb1
complexed with mrd
Domain d1vbkb2: 1vbk B:1-175 [119960]
Other proteins in same PDB: d1vbka1, d1vbkb1
automatically matched to 1VBK A:1-175
complexed with mrd
More info for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.308.1.1 Hypothetical protein PH1313, N-terminal domain
Timeline for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.308.1.1 Hypothetical protein PH1313, N-terminal domain:
- Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.308.1.1 Hypothetical protein PH1313, N-terminal domain is new in SCOP 1.73
- Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.308.1.1 Hypothetical protein PH1313, N-terminal domain appears in SCOP 1.75
- Species Archaeon Pyrococcus horikoshii [TaxId:53953] from d.308.1.1 Hypothetical protein PH1313, N-terminal domain appears in the current release, SCOPe 2.08, called Species Pyrococcus horikoshii [TaxId:53953] from d.308.1.1 Hypothetical protein PH1313, N-terminal domain