SCOPe 2.05: Family d.306.1.1: YefM-like

Lineage for Family d.306.1.1: YefM-like

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.306: YefM-like [143119] (1 superfamily)
   core: beta-alpha(2)-beta(2)-alpha; mixed beta-sheet, order:123, strands 1 and 2 are parallel; forms compact dimer with a single beta-sheet;

4. Superfamily d.306.1: YefM-like [143120] (2 families)

5. Family d.306.1.1: YefM-like [143121] (2 proteins)
   antitoxin component of the YefM/YoeB-like system; binds to the toxin component wia extra C-terminal tail, unstructured in the free state, but adopting a RelB-like conformation in the bound state
   automatically mapped to Pfam PF02604

Proteins:

1. Antitoxin YefM [143122] (1 species)

   • Species Escherichia coli [TaxId:562] [143123] (1 PDB entry)
     Uniprot P69346 1-55! Uniprot P69346 1-83

2. Hypothetical protein NE2111 [143124] (1 species)

   • Species Nitrosomonas europaea [TaxId:915] [143125] (1 PDB entry)
     Uniprot Q82T22 1-51

More info for Family d.306.1.1: YefM-like

Timeline for Family d.306.1.1: YefM-like:

• Family d.306.1.1: YefM-like first appeared in SCOP 1.73
  
• Family d.306.1.1: YefM-like appears in SCOPe 2.04
  
• Family d.306.1.1: YefM-like appears in SCOPe 2.06
  
• Family d.306.1.1: YefM-like appears in the current release, SCOPe 2.08