SCOP 1.75: Protein: Uridylate kinase PyrH

Lineage for Protein: Uridylate kinase PyrH

Root: SCOP 1.75
Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
Fold c.73: Carbamate kinase-like [53632] (1 superfamily)
3 layers: a/b/a; mixed (mainly parallel) beta-sheet of 8 strands, order 34215786; strand 8 is antiparallel to the rest
Superfamily c.73.1: Carbamate kinase-like [53633] (3 families)
the sheet topology is similar to those of undecaprenyl diphosphate synthase and the N-terminal domain of phosphoglycerate kinase
Family c.73.1.3: PyrH-like [142721] (3 proteins)
part of Pfam PF00696
Protein Uridylate kinase PyrH [142728] (6 species)

Species:

Archaeoglobus fulgidus [TaxId:2234] [142732] (1 PDB entry)
Uniprot O28237 1-219
- Domains for 2ij9:
  1. Domain d2ij9a1: 2ij9 A:1-219 [137463]
    complexed with so4; mutant
  2. Domain d2ij9b1: 2ij9 B:1-219 [137464]
    automatically matched to 2IJ9 A:1-219
    complexed with so4; mutant
Escherichia coli [TaxId:562] [142730] (4 PDB entries)
Uniprot P0A7E9 4-240
1. Domains for 2bnd:
  1. Domain d2bnda1: 2bnd A:5-241 [128822]
    complexed with gol, pop, udp; mutant
  2. Domain d2bndb1: 2bnd B:5-241 [128823]
    automatically matched to 2BND A:5-241
    complexed with gol, pop, udp; mutant
2. Domains for 2bne:
  1. Domain d2bnea1: 2bne A:5-241 [128824]
    automatically matched to 2BND A:5-241
    complexed with gol, u5p; mutant
  2. Domain d2bneb1: 2bne B:5-241 [128825]
    automatically matched to 2BND A:5-241
    complexed with gol, u5p; mutant
3. Domains for 2bnf:
  1. Domain d2bnfa1: 2bnf A:5-241 [128826]
    automatically matched to 2BND A:5-241
    complexed with gol, utp; mutant
  2. Domain d2bnfb1: 2bnf B:5-241 [128827]
    automatically matched to 2BND A:5-241
    complexed with gol, utp; mutant
4. Domains for 2v4y:
  1. Domain d2v4ya1: 2v4y A:5-241 [152570]
    automatically matched to d2bnea1
    complexed with gtp; mutant
  2. Domain d2v4yb1: 2v4y B:5-241 [152571]
    automatically matched to d2bnea1
    complexed with gtp; mutant
  3. Domain d2v4yc1: 2v4y C:5-241 [152572]
    automatically matched to d2bnea1
    complexed with gtp; mutant
  4. Domain d2v4yd1: 2v4y D:5-241 [152573]
    automatically matched to d2bnea1
    complexed with gtp; mutant
  5. Domain d2v4ye1: 2v4y E:5-241 [152574]
    automatically matched to d2bnea1
    complexed with gtp; mutant
  6. Domain d2v4yf1: 2v4y F:5-241 [152575]
    automatically matched to d2bnea1
    complexed with gtp; mutant
Haemophilus influenzae [TaxId:727] [142733] (1 PDB entry)
Uniprot P43890 2-237
- Domains for 2a1f:
  1. Domain d2a1fa1: 2a1f A:2-237 [125991]
  2. Domain d2a1fb1: 2a1f B:2-237 [125992]
    automatically matched to 2A1F A:2-237
  3. Domain d2a1fc1: 2a1f C:2-237 [125993]
    automatically matched to 2A1F A:2-237
  4. Domain d2a1fd1: 2a1f D:2-237 [125994]
    automatically matched to 2A1F A:2-237
  5. Domain d2a1fe1: 2a1f E:2-237 [125995]
    automatically matched to 2A1F A:2-237
  6. Domain d2a1ff1: 2a1f F:2-237 [125996]
    automatically matched to 2A1F A:2-237
Neisseria meningitidis [TaxId:487] [142734] (1 PDB entry)
Uniprot P65932 4-239
- Domains for 1ybd:
  1. Domain d1ybda1: 1ybd A:6-241 [122884]
    complexed with fmt, gol
  2. Domain d1ybdb1: 1ybd B:6-241 [122885]
    automatically matched to 1YBD A:6-241
    complexed with fmt, gol
  3. Domain d1ybdc1: 1ybd C:6-241 [122886]
    automatically matched to 1YBD A:6-241
    complexed with fmt, gol
Pyrococcus furiosus [TaxId:2261] [142731] (3 PDB entries)
Uniprot Q8U122 1-225
1. Domains for 2bmu:
  1. Domain d2bmua1: 2bmu A:1-225 [128813]
    automatically matched to 2BRX A:1-225
    complexed with anp, mg, u5p
  2. Domain d2bmub1: 2bmu B:1-225 [128814]
    automatically matched to 2BRX A:1-225
    complexed with anp, mg, u5p
2. Domains for 2bri:
  1. Domain d2bria1: 2bri A:1-225 [128999]
    automatically matched to 2BRX A:1-225
    complexed with anp, mg
  2. Domain d2brib1: 2bri B:1-225 [129000]
    automatically matched to 2BRX A:1-225
    complexed with anp, mg
3. Domains for 2brx:
  1. Domain d2brxa1: 2brx A:1-225 [129028]
  2. Domain d2brxb1: 2brx B:1-225 [129029]
    automatically matched to 2BRX A:1-225
Streptococcus pyogenes [TaxId:1314] [142729] (1 PDB entry)
Uniprot P65938 2-239
- Domains for 1z9d:
  1. Domain d1z9da1: 1z9d A:4-241 [124753]
    complexed with so4
  2. Domain d1z9db1: 1z9d B:4-241 [124754]
    automatically matched to 1Z9D A:4-241
    complexed with so4
  3. Domain d1z9dc1: 1z9d C:4-241 [124755]
    automatically matched to 1Z9D A:4-241
    complexed with so4

More info for Protein Uridylate kinase PyrH from c.73.1.3: PyrH-like

Timeline for Protein Uridylate kinase PyrH from c.73.1.3: PyrH-like:

Protein Uridylate kinase PyrH from c.73.1.3: PyrH-like first appeared in SCOP 1.73
Protein Uridylate kinase PyrH from c.73.1.3: PyrH-like appears in SCOPe 2.01
Protein Uridylate kinase PyrH from c.73.1.3: PyrH-like appears in the current release, SCOPe 2.08