Lineage for Protein: Riboflavin biosynthesis protein RibD

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 707730Fold c.71: Dihydrofolate reductase-like [53596] (1 superfamily)
    3 layers: a/b/a; mixed beta-sheet of 8 strands, order 34251687; strand 8 is antiparallel to the rest
  4. 707731Superfamily c.71.1: Dihydrofolate reductase-like [53597] (2 families) (S)
  5. 707916Family c.71.1.2: RibD C-terminal domain-like [142701] (2 proteins)
    Pfam PF01872
  6. 707925Protein Riboflavin biosynthesis protein RibD [142702] (2 species)

Species:

  1. 707926Bacillus subtilis [TaxId:1423] [142703] (2 PDB entries)
    1. Domains for 2b3z:
      1. 707927Domain d2b3za1: 2b3z A:146-359 [127807]
        Other proteins in same PDB: d2b3za2, d2b3zb2, d2b3zc2, d2b3zd2
        complexed with zn
      2. 707928Domain d2b3zb1: 2b3z B:146-359 [127809]
        Other proteins in same PDB: d2b3za2, d2b3zb2, d2b3zc2, d2b3zd2
        automatically matched to 2B3Z A:146-359
        complexed with zn
      3. 707929Domain d2b3zc1: 2b3z C:146-359 [127811]
        Other proteins in same PDB: d2b3za2, d2b3zb2, d2b3zc2, d2b3zd2
        automatically matched to 2B3Z A:146-359
        complexed with zn
      4. 707930Domain d2b3zd1: 2b3z D:146-359 [127813]
        Other proteins in same PDB: d2b3za2, d2b3zb2, d2b3zc2, d2b3zd2
        automatically matched to 2B3Z A:146-359
        complexed with zn
    2. Domains for 2d5n:
      1. 707931Domain d2d5na1: 2d5n A:146-359 [131273]
        Other proteins in same PDB: d2d5na2, d2d5nb2, d2d5nc2, d2d5nd2
        automatically matched to 2B3Z A:146-359
        complexed with ndp, zn
      2. 707932Domain d2d5nb1: 2d5n B:146-359 [131275]
        Other proteins in same PDB: d2d5na2, d2d5nb2, d2d5nc2, d2d5nd2
        automatically matched to 2B3Z A:146-359
        complexed with ndp, zn
      3. 707933Domain d2d5nc1: 2d5n C:146-359 [131277]
        Other proteins in same PDB: d2d5na2, d2d5nb2, d2d5nc2, d2d5nd2
        automatically matched to 2B3Z A:146-359
        complexed with ndp, zn
      4. 707934Domain d2d5nd1: 2d5n D:146-359 [131279]
        Other proteins in same PDB: d2d5na2, d2d5nb2, d2d5nc2, d2d5nd2
        automatically matched to 2B3Z A:146-359
        complexed with ndp, zn
  2. 707935Thermotoga maritima [TaxId:2336] [142704] (1 PDB entry)

More info for Protein Riboflavin biosynthesis protein RibD from c.71.1.2: RibD C-terminal domain-like

Timeline for Protein Riboflavin biosynthesis protein RibD from c.71.1.2: RibD C-terminal domain-like:

  • Protein Riboflavin biosynthesis protein RibD from c.71.1.2: RibD C-terminal domain-like is new in SCOP 1.73
  • Protein Riboflavin biosynthesis protein RibD from c.71.1.2: RibD C-terminal domain-like appears in SCOP 1.75
  • Protein Riboflavin biosynthesis protein RibD from c.71.1.2: RibD C-terminal domain-like appears in the current release, SCOPe 2.07