Lineage for Protein: BH0863-like Ribonuclease H

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2123752Family c.55.3.1: Ribonuclease H [53099] (5 protein domains)
  6. 2123753Protein BH0863-like Ribonuclease H [142490] (3 species)
    new class of RNase H

Species:

  1. 2123754Bacillus halodurans [TaxId:86665] [142491] (21 PDB entries)
    Uniprot Q9KEI9 61-193! Uniprot Q9KEI9 62-193
    BH0863
    1. Domain for 1zbf:
    2. Domain for 1zbl:
    3. Domain for 2g8f:
      • 2123762Domain d2g8fa1: 2g8f A:61-193 [134770]
        protein/DNA complex; protein/RNA complex; complexed with cl, mg; mutant
    4. Domain for 2g8h:
      • 2123777Domain d2g8ha_: 2g8h A: [134771]
        automated match to d1zbla1
        protein/DNA complex; protein/RNA complex; complexed with mg, vo4; mutant
    5. Domain for 2g8i:
      • 2123760Domain d2g8ia_: 2g8i A: [134772]
        automated match to d1zbla1
        protein/DNA complex; protein/RNA complex; complexed with cl, mn, mpd; mutant
    6. Domain for 2g8k:
      • 2123761Domain d2g8ka_: 2g8k A: [134774]
        automated match to d1zbla1
        protein/DNA complex; protein/RNA complex; complexed with ca; mutant
    7. Domain for 2g8u:
      • 2123783Domain d2g8ua_: 2g8u A: [134786]
        automated match to d1zbfa1
        protein/DNA complex; protein/RNA complex; complexed with mg; mutant
    8. Domain for 2g8v:
      • 2123772Domain d2g8va_: 2g8v A: [134787]
        automated match to d2g8fa1
        protein/DNA complex; protein/RNA complex; complexed with eoh, mg; mutant
    9. Domain for 2g8w:
      • 2123781Domain d2g8wa_: 2g8w A: [134788]
        automated match to d2g8fa1
        protein/DNA complex; protein/RNA complex; complexed with ca; mutant
    10. Domain for 2r7y:
      • 2123769Domain d2r7ya_: 2r7y A: [151657]
        automated match to d1zbfa1
        protein/DNA complex; protein/RNA complex; complexed with mg, po4; mutant
    11. Domains for 3d0p:
      1. 2123775Domain d3d0pa1: 3d0p A:62-193 [157172]
        automatically matched to d1zbfa1
        protein/DNA complex; protein/RNA complex; complexed with na
      2. 2123776Domain d3d0pc1: 3d0p C:62-193 [157173]
        automatically matched to d1zbfa1
        protein/DNA complex; protein/RNA complex; complexed with na
    12. Domain for 3ey1:
    13. Domains for 3i8d:
      1. 2123763Domain d3i8da_: 3i8d A: [178144]
        automated match to d1zbfa1
        protein/DNA complex; complexed with gol
      2. 2123764Domain d3i8dc_: 3i8d C: [178145]
        automated match to d1zbfa1
        protein/DNA complex; complexed with gol
    14. Domain for 3twh:
      • 2123780Domain d3twha_: 3twh A: [194591]
        automated match to d3ey1a_
        protein/DNA complex; protein/RNA complex; complexed with mg, po4; mutant
    15. Domain for 3uld:
      • 2123767Domain d3ulda_: 3uld A: [194320]
        automated match to d3ey1a_
        protein/DNA complex; protein/RNA complex; complexed with mg; mutant
    16. Domains for 4htu:
      1. 2123756Domain d4htua_: 4htu A: [192575]
        automated match to d1zbfa1
        protein/DNA complex; complexed with edo, gol, mg
      2. 2123757Domain d4htub_: 4htu B: [192574]
        automated match to d1zbfa1
        protein/DNA complex; complexed with edo, gol, mg
    17. Domains for 4hue:
      1. 2123758Domain d4huea_: 4hue A: [192577]
        automated match to d1zbfa1
        protein/DNA complex; complexed with gol, mg
      2. 2123759Domain d4hueb_: 4hue B: [192899]
        automated match to d4htua_
        protein/DNA complex; complexed with gol, mg
    18. Domains for 4huf:
      1. 2123770Domain d4hufa_: 4huf A: [192576]
        automated match to d1zbfa1
        protein/DNA complex; complexed with edo, gol, mg
      2. 2123771Domain d4hufb_: 4huf B: [192898]
        automated match to d4htua_
        protein/DNA complex; complexed with edo, gol, mg
    19. Domains for 4hug:
      1. 2123765Domain d4huga_: 4hug A: [192578]
        automated match to d1zbfa1
        protein/DNA complex; complexed with edo, gol, mg
      2. 2123766Domain d4hugb_: 4hug B: [192900]
        automated match to d4htua_
        protein/DNA complex; complexed with edo, gol, mg
    20. Domains for 4opj:
      1. 2123773Domain d4opja_: 4opj A: [275922]
        automated match to d1zbfa1
        protein/DNA complex; complexed with gol
      2. 2123774Domain d4opjc_: 4opj C: [275920]
        automated match to d1zbfa1
        protein/DNA complex; complexed with gol
    21. Domains for 4opk:
      1. 2123778Domain d4opka_: 4opk A: [275921]
        automated match to d1zbfa1
        protein/DNA complex; complexed with gol
      2. 2123779Domain d4opkc_: 4opk C: [275923]
        automated match to d1zbfa1
        protein/DNA complex; complexed with gol
  2. 2123784Escherichia coli [TaxId:562] [190024] (1 PDB entry)
  3. 2123786Shewanella oneidensis [TaxId:211586] [190023] (1 PDB entry)

More info for Protein BH0863-like Ribonuclease H from c.55.3.1: Ribonuclease H

Timeline for Protein BH0863-like Ribonuclease H from c.55.3.1: Ribonuclease H: