Lineage for Protein: Rab8a

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2866675Family c.37.1.8: G proteins [52592] (81 proteins)
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. 2867502Protein Rab8a [142293] (2 species)

Species:

  1. 2867503Human (Homo sapiens) [TaxId:9606] [254870] (14 PDB entries)
    1. Domains for 4lhv:
      1. 2867520Domain d4lhva1: 4lhv A:6-176 [229853]
        Other proteins in same PDB: d4lhva2, d4lhvb2, d4lhve2
        automated match to d4lhvd_
        complexed with gdp, mg
      2. 2867521Domain d4lhvb1: 4lhv B:6-176 [229852]
        Other proteins in same PDB: d4lhva2, d4lhvb2, d4lhve2
        automated match to d4lhvd_
        complexed with gdp, mg
      3. 2867522Domain d4lhvc_: 4lhv C: [229857]
        Other proteins in same PDB: d4lhva2, d4lhvb2, d4lhve2
        automated match to d4lhvd_
        complexed with gdp, mg
      4. 2867523Domain d4lhvd_: 4lhv D: [228234]
        Other proteins in same PDB: d4lhva2, d4lhvb2, d4lhve2
        automated match to d3bc1a_
        complexed with gdp, mg
      5. 2867524Domain d4lhve1: 4lhv E:6-174 [228233]
        Other proteins in same PDB: d4lhva2, d4lhvb2, d4lhve2
        automated match to d3bc1a_
        complexed with gdp, mg
    2. Domains for 4lhw:
      1. 2867504Domain d4lhwa_: 4lhw A: [229859]
        Other proteins in same PDB: d4lhwb2, d4lhwd2
        automated match to d4lhvd_
        complexed with gnp, mg, mpd
      2. 2867505Domain d4lhwb1: 4lhw B:6-175 [229858]
        Other proteins in same PDB: d4lhwb2, d4lhwd2
        automated match to d4lhve_
        complexed with gnp, mg, mpd
      3. 2867506Domain d4lhwc_: 4lhw C: [229856]
        Other proteins in same PDB: d4lhwb2, d4lhwd2
        automated match to d4lhvd_
        complexed with gnp, mg, mpd
      4. 2867507Domain d4lhwd1: 4lhw D:6-176 [229855]
        Other proteins in same PDB: d4lhwb2, d4lhwd2
        automated match to d4lhvd_
        complexed with gnp, mg, mpd
      5. 2867508Domain d4lhwe_: 4lhw E: [229854]
        Other proteins in same PDB: d4lhwb2, d4lhwd2
        automated match to d4lhvd_
        complexed with gnp, mg, mpd
    3. Domains for 4lhx:
      1. 2867534Domain d4lhxa_: 4lhx A: [253589]
        automated match to d1zbda_
        complexed with so4
      2. 2867535Domain d4lhxb_: 4lhx B: [253590]
        automated match to d1zbda_
        complexed with so4
    4. Domains for 4lhy:
      1. 2867536Domain d4lhya_: 4lhy A: [253591]
        automated match to d1zbda_
        complexed with gdp, so4
      2. 2867537Domain d4lhyb_: 4lhy B: [253592]
        automated match to d1zbda_
        complexed with gdp, so4
    5. Domain for 5szi:
    6. Domains for 6rir:
      1. 2867516Domain d6rira_: 6rir A: [379616]
        Other proteins in same PDB: d6rirb2
        automated match to d1zbda_
        complexed with gol, gtp, mg, tpo
      2. 2867517Domain d6rirb1: 6rir B:3-176 [379647]
        Other proteins in same PDB: d6rirb2
        automated match to d1zbda_
        complexed with gol, gtp, mg, tpo
    7. Domains for 6sq2:
      1. 2867511Domain d6sq2a1: 6sq2 A:3-177 [391631]
        Other proteins in same PDB: d6sq2a2
        automated match to d1zbda_
        complexed with gtp, mg
      2. 2867512Domain d6sq2b_: 6sq2 B: [391544]
        Other proteins in same PDB: d6sq2a2
        automated match to d1zbda_
        complexed with gtp, mg
    8. Domains for 6stf:
      1. 2867526Domain d6stfa1: 6stf A:6-176 [384588]
        Other proteins in same PDB: d6stfa2, d6stfa3, d6stfb2, d6stfb3, d6stfe2
        automated match to d4lhxa_
        complexed with gdp, mg, sep
      2. 2867527Domain d6stfb1: 6stf B:6-176 [384442]
        Other proteins in same PDB: d6stfa2, d6stfa3, d6stfb2, d6stfb3, d6stfe2
        automated match to d4lhxa_
        complexed with gdp, mg, sep
      3. 2867528Domain d6stfc_: 6stf C: [384284]
        Other proteins in same PDB: d6stfa2, d6stfa3, d6stfb2, d6stfb3, d6stfe2
        automated match to d4lhxa_
        complexed with gdp, mg, sep
      4. 2867529Domain d6stfd_: 6stf D: [384449]
        Other proteins in same PDB: d6stfa2, d6stfa3, d6stfb2, d6stfb3, d6stfe2
        automated match to d4lhxa_
        complexed with gdp, mg, sep
      5. 2867530Domain d6stfe1: 6stf E:6-176 [384469]
        Other proteins in same PDB: d6stfa2, d6stfa3, d6stfb2, d6stfb3, d6stfe2
        automated match to d4lhxa_
        complexed with gdp, mg, sep
    9. Domains for 6stg:
      1. 2867531Domain d6stga1: 6stg A:6-176 [384260]
        Other proteins in same PDB: d6stga2
        automated match to d4lhxa_
        complexed with gnp, mg, sep, trs
      2. 2867532Domain d6stgb_: 6stg B: [384256]
        Other proteins in same PDB: d6stga2
        automated match to d4lhxa_
        complexed with gnp, mg, sep, trs
    10. Domains for 6whe:
      1. 2867509Domain d6whea_: 6whe A: [400946]
        automated match to d1zbda_
        complexed with gol, gtp, mg
      2. 2867510Domain d6wheb_: 6whe B: [400957]
        automated match to d1zbda_
        complexed with gol, gtp, mg
    11. Domains for 6zsi:
      1. 2867514Domain d6zsia_: 6zsi A: [394134]
        automated match to d1zbda_
        complexed with gnp, mg, peg
      2. 2867515Domain d6zsib_: 6zsi B: [394144]
        automated match to d1zbda_
        complexed with gnp, mg, peg
    12. Domains for 6zsj:
      1. 2867518Domain d6zsja_: 6zsj A: [394157]
        automated match to d1zbda_
        complexed with gnp, mg
      2. 2867519Domain d6zsjb_: 6zsj B: [394160]
        automated match to d1zbda_
        complexed with gnp, mg
    13. Domain for 7bwt:
    14. Domain for 7lwb:
  2. 2867538Mouse (Mus musculus) [TaxId:10090] [142294] (1 PDB entry)
    Uniprot P55258 3-175

More info for Protein Rab8a from c.37.1.8: G proteins

Timeline for Protein Rab8a from c.37.1.8: G proteins: