SCOPe 2.07: Protein: Trafficking protein B

Lineage for Protein: Trafficking protein B

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.120: PIN domain-like [88722] (1 superfamily)
3 layers, a/b/a; core: parallel beta-sheet of 5 strands, order 32145
Superfamily c.120.1: PIN domain-like [88723] (3 families)
Family c.120.1.1: PIN domain [89619] (7 proteins)
Pfam PF01850
Protein Trafficking protein B [142110] (1 species)

Species:

Neisseria gonorrhoeae [TaxId:485] [142111] (3 PDB entries)
Uniprot Q5F882 1-138! Uniprot Q9RF91 1-138
1. Domains for 2bsq:
  1. Domain d2bsqa1: 2bsq A:1-138 [129098]
    Other proteins in same PDB: d2bsqa2, d2bsqb2, d2bsqc2, d2bsqd2, d2bsqe1, d2bsqf1, d2bsqg1, d2bsqh1
    protein/DNA complex
  2. Domain d2bsqb1: 2bsq B:1-138 [129099]
    Other proteins in same PDB: d2bsqa2, d2bsqb2, d2bsqc2, d2bsqd2, d2bsqe1, d2bsqf1, d2bsqg1, d2bsqh1
    automatically matched to 2BSQ A:1-138
    protein/DNA complex
  3. Domain d2bsqc1: 2bsq C:1-138 [129100]
    Other proteins in same PDB: d2bsqa2, d2bsqb2, d2bsqc2, d2bsqd2, d2bsqe1, d2bsqf1, d2bsqg1, d2bsqh1
    automatically matched to 2BSQ A:1-138
    protein/DNA complex
  4. Domain d2bsqd1: 2bsq D:1-138 [129101]
    Other proteins in same PDB: d2bsqa2, d2bsqb2, d2bsqc2, d2bsqd2, d2bsqe1, d2bsqf1, d2bsqg1, d2bsqh1
    automatically matched to 2BSQ A:1-138
    protein/DNA complex
2. Domain for 2h1c:
  - Domain d2h1ca1: 2h1c A:1-138 [135944]
    Other proteins in same PDB: d2h1ca2
    complexed with the C-terminal segment of Trafficking protein A (chain B)
    complexed with act, mg, so4
3. Domains for 2h1o:
  1. Domain d2h1oa1: 2h1o A:1-138 [135971]
    Other proteins in same PDB: d2h1oa2, d2h1ob2, d2h1oc2, d2h1od2, d2h1oe1, d2h1of1, d2h1og1, d2h1oh1
    automatically matched to 2BSQ A:1-138
    protein/DNA complex
  2. Domain d2h1ob1: 2h1o B:1-138 [135972]
    Other proteins in same PDB: d2h1oa2, d2h1ob2, d2h1oc2, d2h1od2, d2h1oe1, d2h1of1, d2h1og1, d2h1oh1
    automatically matched to 2BSQ A:1-138
    protein/DNA complex
  3. Domain d2h1oc1: 2h1o C:1-138 [135973]
    Other proteins in same PDB: d2h1oa2, d2h1ob2, d2h1oc2, d2h1od2, d2h1oe1, d2h1of1, d2h1og1, d2h1oh1
    automatically matched to 2BSQ A:1-138
    protein/DNA complex
  4. Domain d2h1od1: 2h1o D:1-138 [135974]
    Other proteins in same PDB: d2h1oa2, d2h1ob2, d2h1oc2, d2h1od2, d2h1oe1, d2h1of1, d2h1og1, d2h1oh1
    automatically matched to 2BSQ A:1-138
    protein/DNA complex

More info for Protein Trafficking protein B from c.120.1.1: PIN domain

Timeline for Protein Trafficking protein B from c.120.1.1: PIN domain:

Protein Trafficking protein B from c.120.1.1: PIN domain first appeared in SCOP 1.73
Protein Trafficking protein B from c.120.1.1: PIN domain appears in SCOPe 2.06
Protein Trafficking protein B from c.120.1.1: PIN domain appears in the current release, SCOPe 2.08