SCOPe 2.08: Protein: Prephenate dehydrogenase TyrA

Lineage for Protein: Prephenate dehydrogenase TyrA

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
The nucleotide-binding modes of this and the next two folds/superfamilies are similar

Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

Family c.2.1.6: 6-phosphogluconate dehydrogenase-like, N-terminal domain [51868] (19 proteins)
the beta-sheet is extended to 8 strands, order 32145678; strands 7 & 8 are antiparallel to the rest
C-terminal domains also show some similarity

Protein Prephenate dehydrogenase TyrA [141929] (3 species)

Species:

Aquifex aeolicus [TaxId:63363] [141930] (1 PDB entry)
Uniprot O67636 30-200
- Domains for 2g5c:
  1. Domain d2g5ca2: 2g5c A:30-200 [134647]
    Other proteins in same PDB: d2g5ca1, d2g5cb1, d2g5cc1, d2g5cd1
    complexed with nad
  2. Domain d2g5cb2: 2g5c B:31-200 [134649]
    Other proteins in same PDB: d2g5ca1, d2g5cb1, d2g5cc1, d2g5cd1
    automated match to d2g5ca2
    complexed with nad
  3. Domain d2g5cc2: 2g5c C:30-200 [134651]
    Other proteins in same PDB: d2g5ca1, d2g5cb1, d2g5cc1, d2g5cd1
    automated match to d2g5ca2
    complexed with nad
  4. Domain d2g5cd2: 2g5c D:30-200 [134653]
    Other proteins in same PDB: d2g5ca1, d2g5cb1, d2g5cc1, d2g5cd1
    automated match to d2g5ca2
    complexed with nad
Haemophilus influenzae [TaxId:727] [159425] (1 PDB entry)
Uniprot P43902 92-243
- Domains for 2pv7:
  1. Domain d2pv7a2: 2pv7 A:92-243 [149888]
    Other proteins in same PDB: d2pv7a1, d2pv7b1
    complexed with nad, tyr
  2. Domain d2pv7b2: 2pv7 B:92-243 [149890]
    Other proteins in same PDB: d2pv7a1, d2pv7b1
    automated match to d2pv7a2
    complexed with nad, tyr
Synechocystis sp. PCC 6803 [TaxId:1148] [141931] (1 PDB entry)
Uniprot P73906 1-165
- Domains for 2f1k:
  1. Domain d2f1ka2: 2f1k A:1-165 [132773]
    Other proteins in same PDB: d2f1ka1, d2f1kb1, d2f1kc1, d2f1kd1
    complexed with nap, trs
  2. Domain d2f1kb2: 2f1k B:1-165 [132775]
    Other proteins in same PDB: d2f1ka1, d2f1kb1, d2f1kc1, d2f1kd1
    automated match to d2f1ka2
    complexed with nap, trs
  3. Domain d2f1kc2: 2f1k C:1-165 [132777]
    Other proteins in same PDB: d2f1ka1, d2f1kb1, d2f1kc1, d2f1kd1
    automated match to d2f1ka2
    complexed with nap, trs
  4. Domain d2f1kd2: 2f1k D:1-165 [132779]
    Other proteins in same PDB: d2f1ka1, d2f1kb1, d2f1kc1, d2f1kd1
    automated match to d2f1ka2
    complexed with nap, trs

More info for Protein Prephenate dehydrogenase TyrA from c.2.1.6: 6-phosphogluconate dehydrogenase-like, N-terminal domain

Timeline for Protein Prephenate dehydrogenase TyrA from c.2.1.6: 6-phosphogluconate dehydrogenase-like, N-terminal domain:

Protein Prephenate dehydrogenase TyrA from c.2.1.6: 6-phosphogluconate dehydrogenase-like, N-terminal domain first appeared in SCOP 1.73
Protein Prephenate dehydrogenase TyrA from c.2.1.6: 6-phosphogluconate dehydrogenase-like, N-terminal domain appears in SCOPe 2.07