Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
    has additional subdomain(s) that are not in the common domain
  6. 2842489Protein GDP-mannose-3', 5'-epimerase [141890] (1 species)
  7. 2842490Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [141891] (4 PDB entries)
    Uniprot Q93VR3 13-374! Uniprot Q93VR3 13-375

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 2c54:
    • 2842492Domain d2c54a1: 2c54 A:13-374 [129877]
      Other proteins in same PDB: d2c54b_
      complexed with epe, fmt, gkd, gke, nad
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 2c59:
    • 2842494Domain d2c59a1: 2c59 A:13-375 [129892]
      Other proteins in same PDB: d2c59b_
      complexed with btb, fmt, gdc, gdd, nad
      has additional subdomain(s) that are not in the common domain
  3. Domain(s) for 2c5a:
    • 2842491Domain d2c5aa1: 2c5a A:13-375 [129894]
      Other proteins in same PDB: d2c5ab_
      complexed with btb, fmt, gdc, nad
      has additional subdomain(s) that are not in the common domain
  4. Domain(s) for 2c5e:
    • 2842493Domain d2c5ea1: 2c5e A:13-375 [129912]
      Other proteins in same PDB: d2c5eb_
      complexed with fmt, gdd, nad
      has additional subdomain(s) that are not in the common domain

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.2.1.2 GDP-mannose-3', 5'-epimerase

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.2.1.2 GDP-mannose-3', 5'-epimerase: