Lineage for Protein: Dihydropyrimidine amidohydrolase Pyd2

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2084338Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2084618Family c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain [75073] (5 protein domains)
    automatically mapped to Pfam PF13147
  6. 2084652Protein Dihydropyrimidine amidohydrolase Pyd2 [141805] (2 species)

Species:

  1. 2084653Slime mold (Dictyostelium discoideum) [TaxId:44689] [141807] (1 PDB entry)
    Uniprot Q86LT2 60-393
  2. 2084655Yeast (Saccharomyces kluyveri) [TaxId:4934] [141806] (3 PDB entries)
    Uniprot Q9P903 57-440
    1. Domains for 2fty:
      1. 2084664Domain d2ftya2: 2fty A:57-440 [134088]
        Other proteins in same PDB: d2ftya1, d2ftyb1, d2ftyc1, d2ftyd1
        complexed with zn
      2. 2084665Domain d2ftyb2: 2fty B:57-440 [134090]
        Other proteins in same PDB: d2ftya1, d2ftyb1, d2ftyc1, d2ftyd1
        automated match to d2ftya2
        complexed with zn
      3. 2084666Domain d2ftyc2: 2fty C:57-440 [134092]
        Other proteins in same PDB: d2ftya1, d2ftyb1, d2ftyc1, d2ftyd1
        automated match to d2ftya2
        complexed with zn
      4. 2084667Domain d2ftyd2: 2fty D:57-440 [134094]
        Other proteins in same PDB: d2ftya1, d2ftyb1, d2ftyc1, d2ftyd1
        automated match to d2ftya2
        complexed with zn
    2. Domains for 2fvk:
      1. 2084656Domain d2fvka2: 2fvk A:57-440 [134205]
        Other proteins in same PDB: d2fvka1, d2fvkb1, d2fvkc1, d2fvkd1
        automated match to d2ftya2
        complexed with duc, zn
      2. 2084657Domain d2fvkb2: 2fvk B:57-440 [134207]
        Other proteins in same PDB: d2fvka1, d2fvkb1, d2fvkc1, d2fvkd1
        automated match to d2ftya2
        complexed with duc, zn
      3. 2084658Domain d2fvkc2: 2fvk C:57-440 [134209]
        Other proteins in same PDB: d2fvka1, d2fvkb1, d2fvkc1, d2fvkd1
        automated match to d2ftya2
        complexed with duc, zn
      4. 2084659Domain d2fvkd2: 2fvk D:57-440 [134211]
        Other proteins in same PDB: d2fvka1, d2fvkb1, d2fvkc1, d2fvkd1
        automated match to d2ftya2
        complexed with duc, zn
    3. Domains for 2fvm:
      1. 2084660Domain d2fvma2: 2fvm A:57-440 [134213]
        Other proteins in same PDB: d2fvma1, d2fvmb1, d2fvmc1, d2fvmd1
        automated match to d2ftya2
        complexed with urp, zn
      2. 2084661Domain d2fvmb2: 2fvm B:57-440 [134215]
        Other proteins in same PDB: d2fvma1, d2fvmb1, d2fvmc1, d2fvmd1
        automated match to d2ftya2
        complexed with urp, zn
      3. 2084662Domain d2fvmc2: 2fvm C:57-440 [134217]
        Other proteins in same PDB: d2fvma1, d2fvmb1, d2fvmc1, d2fvmd1
        automated match to d2ftya2
        complexed with urp, zn
      4. 2084663Domain d2fvmd2: 2fvm D:57-440 [134219]
        Other proteins in same PDB: d2fvma1, d2fvmb1, d2fvmc1, d2fvmd1
        automated match to d2ftya2
        complexed with urp, zn

More info for Protein Dihydropyrimidine amidohydrolase Pyd2 from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain

Timeline for Protein Dihydropyrimidine amidohydrolase Pyd2 from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain:

  • Protein Dihydropyrimidine amidohydrolase Pyd2 from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain first appeared in SCOP 1.73
  • Protein Dihydropyrimidine amidohydrolase Pyd2 from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain appears in SCOPe 2.05