Lineage for Protein: Dihydropyrimidine amidohydrolase Pyd2

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2833366Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2833715Family c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain [75073] (5 proteins)
    automatically mapped to Pfam PF13147
  6. 2833749Protein Dihydropyrimidine amidohydrolase Pyd2 [141805] (2 species)

Species:

  1. 2833750Slime mold (Dictyostelium discoideum) [TaxId:44689] [141807] (1 PDB entry)
    Uniprot Q86LT2 60-393
  2. 2833752Yeast (Saccharomyces kluyveri) [TaxId:4934] [141806] (3 PDB entries)
    Uniprot Q9P903 57-440
    1. Domains for 2fty:
      1. 2833761Domain d2ftya2: 2fty A:57-440 [134088]
        Other proteins in same PDB: d2ftya1, d2ftyb1, d2ftyc1, d2ftyd1
        complexed with zn
      2. 2833762Domain d2ftyb2: 2fty B:57-440 [134090]
        Other proteins in same PDB: d2ftya1, d2ftyb1, d2ftyc1, d2ftyd1
        automated match to d2ftya2
        complexed with zn
      3. 2833763Domain d2ftyc2: 2fty C:57-440 [134092]
        Other proteins in same PDB: d2ftya1, d2ftyb1, d2ftyc1, d2ftyd1
        automated match to d2ftya2
        complexed with zn
      4. 2833764Domain d2ftyd2: 2fty D:57-440 [134094]
        Other proteins in same PDB: d2ftya1, d2ftyb1, d2ftyc1, d2ftyd1
        automated match to d2ftya2
        complexed with zn
    2. Domains for 2fvk:
      1. 2833753Domain d2fvka2: 2fvk A:57-440 [134205]
        Other proteins in same PDB: d2fvka1, d2fvkb1, d2fvkc1, d2fvkd1
        automated match to d2ftya2
        complexed with duc, zn
      2. 2833754Domain d2fvkb2: 2fvk B:57-440 [134207]
        Other proteins in same PDB: d2fvka1, d2fvkb1, d2fvkc1, d2fvkd1
        automated match to d2ftya2
        complexed with duc, zn
      3. 2833755Domain d2fvkc2: 2fvk C:57-440 [134209]
        Other proteins in same PDB: d2fvka1, d2fvkb1, d2fvkc1, d2fvkd1
        automated match to d2ftya2
        complexed with duc, zn
      4. 2833756Domain d2fvkd2: 2fvk D:57-440 [134211]
        Other proteins in same PDB: d2fvka1, d2fvkb1, d2fvkc1, d2fvkd1
        automated match to d2ftya2
        complexed with duc, zn
    3. Domains for 2fvm:
      1. 2833757Domain d2fvma2: 2fvm A:57-440 [134213]
        Other proteins in same PDB: d2fvma1, d2fvmb1, d2fvmc1, d2fvmd1
        automated match to d2ftya2
        complexed with urp, zn
      2. 2833758Domain d2fvmb2: 2fvm B:57-440 [134215]
        Other proteins in same PDB: d2fvma1, d2fvmb1, d2fvmc1, d2fvmd1
        automated match to d2ftya2
        complexed with urp, zn
      3. 2833759Domain d2fvmc2: 2fvm C:57-440 [134217]
        Other proteins in same PDB: d2fvma1, d2fvmb1, d2fvmc1, d2fvmd1
        automated match to d2ftya2
        complexed with urp, zn
      4. 2833760Domain d2fvmd2: 2fvm D:57-440 [134219]
        Other proteins in same PDB: d2fvma1, d2fvmb1, d2fvmc1, d2fvmd1
        automated match to d2ftya2
        complexed with urp, zn

More info for Protein Dihydropyrimidine amidohydrolase Pyd2 from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain

Timeline for Protein Dihydropyrimidine amidohydrolase Pyd2 from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain:

  • Protein Dihydropyrimidine amidohydrolase Pyd2 from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain first appeared in SCOP 1.73
  • Protein Dihydropyrimidine amidohydrolase Pyd2 from c.1.9.6: Hydantoinase (dihydropyrimidinase), catalytic domain appears in SCOPe 2.07