Lineage for Species: Potato (Solanum tuberosum) [TaxId: 4113]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2813832Fold b.81: Single-stranded left-handed beta-helix [51160] (4 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2813833Superfamily b.81.1: Trimeric LpxA-like enzymes [51161] (9 families) (S)
    superhelical turns are made of three short strands; duplication: the sequence hexapeptide repeats correspond to individual strands
  5. 2814014Family b.81.1.4: GlmU C-terminal domain-like [51171] (4 proteins)
    this is a repeat family; one repeat unit is 2oi5 A:321-339 found in domain
  6. 2814015Protein Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain [141579] (1 species)
  7. 2814016Species Potato (Solanum tuberosum) [TaxId:4113] [141580] (3 PDB entries)
    Uniprot P23509 387-521

PDB entries in Species: Potato (Solanum tuberosum) [TaxId: 4113]:

  1. Domain(s) for 1yp2:
    1. 2814017Domain d1yp2a1: 1yp2 A:317-451 [123798]
      Other proteins in same PDB: d1yp2a2, d1yp2b2, d1yp2c2, d1yp2d2
      complexed with pmb, so4
      has additional insertions and/or extensions that are not grouped together
    2. 2814018Domain d1yp2b1: 1yp2 B:317-451 [123800]
      Other proteins in same PDB: d1yp2a2, d1yp2b2, d1yp2c2, d1yp2d2
      automated match to d1yp2a1
      complexed with pmb, so4
      has additional insertions and/or extensions that are not grouped together
    3. 2814019Domain d1yp2c1: 1yp2 C:317-451 [123802]
      Other proteins in same PDB: d1yp2a2, d1yp2b2, d1yp2c2, d1yp2d2
      automated match to d1yp2a1
      complexed with pmb, so4
      has additional insertions and/or extensions that are not grouped together
    4. 2814020Domain d1yp2d1: 1yp2 D:317-451 [123804]
      Other proteins in same PDB: d1yp2a2, d1yp2b2, d1yp2c2, d1yp2d2
      automated match to d1yp2a1
      complexed with pmb, so4
      has additional insertions and/or extensions that are not grouped together
  2. Domain(s) for 1yp3:
    1. 2814025Domain d1yp3a1: 1yp3 A:317-451 [123806]
      Other proteins in same PDB: d1yp3a2, d1yp3b2, d1yp3c2, d1yp3d2
      automated match to d1yp2a1
      complexed with atp, so4
      has additional insertions and/or extensions that are not grouped together
    2. 2814026Domain d1yp3b1: 1yp3 B:317-451 [123808]
      Other proteins in same PDB: d1yp3a2, d1yp3b2, d1yp3c2, d1yp3d2
      automated match to d1yp2a1
      complexed with atp, so4
      has additional insertions and/or extensions that are not grouped together
    3. 2814027Domain d1yp3c1: 1yp3 C:317-451 [123810]
      Other proteins in same PDB: d1yp3a2, d1yp3b2, d1yp3c2, d1yp3d2
      automated match to d1yp2a1
      complexed with atp, so4
      has additional insertions and/or extensions that are not grouped together
    4. 2814028Domain d1yp3d1: 1yp3 D:317-451 [123812]
      Other proteins in same PDB: d1yp3a2, d1yp3b2, d1yp3c2, d1yp3d2
      automated match to d1yp2a1
      complexed with atp, so4
      has additional insertions and/or extensions that are not grouped together
  3. Domain(s) for 1yp4:
    1. 2814021Domain d1yp4a1: 1yp4 A:317-451 [123814]
      Other proteins in same PDB: d1yp4a2, d1yp4b2, d1yp4c2, d1yp4d2
      automated match to d1yp2a1
      complexed with adp, adq, so4
      has additional insertions and/or extensions that are not grouped together
    2. 2814022Domain d1yp4b1: 1yp4 B:317-451 [123816]
      Other proteins in same PDB: d1yp4a2, d1yp4b2, d1yp4c2, d1yp4d2
      automated match to d1yp2a1
      complexed with adp, adq, so4
      has additional insertions and/or extensions that are not grouped together
    3. 2814023Domain d1yp4c1: 1yp4 C:317-451 [123818]
      Other proteins in same PDB: d1yp4a2, d1yp4b2, d1yp4c2, d1yp4d2
      automated match to d1yp2a1
      complexed with adp, adq, so4
      has additional insertions and/or extensions that are not grouped together
    4. 2814024Domain d1yp4d1: 1yp4 D:317-451 [123820]
      Other proteins in same PDB: d1yp4a2, d1yp4b2, d1yp4c2, d1yp4d2
      automated match to d1yp2a1
      complexed with adp, adq, so4
      has additional insertions and/or extensions that are not grouped together

More info for Species Potato (Solanum tuberosum) [TaxId:4113] from b.81.1.4 Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain

Timeline for Species Potato (Solanum tuberosum) [TaxId:4113] from b.81.1.4 Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain: