SCOPe 2.01: Family b.80.8.1: Pentapeptide repeats

Lineage for Family b.80.8.1: Pentapeptide repeats

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
   superhelix turns are made of parallel beta-strands and (short) turns

4. Superfamily b.80.8: Pentapeptide repeat-like [141571] (2 families)
   superhelix turns are made of four short strands each; duplication: the sequence pentapeptide repeats correspond to individual strands

5. Family b.80.8.1: Pentapeptide repeats [141572] (4 proteins)
   Pfam PF00805 (covers eight repeats or two full superhelical turns)
   this is a repeat family; one repeat unit is 2bm4 A:81-101 found in domain

Proteins:

1. Hypothetical protein Rv3361c (MT3469) [141573] (1 species)

   • Species Mycobacterium tuberculosis [TaxId:1773] [141574] (1 PDB entry)
     Uniprot O50390 2-182

2. Lumenal RFR-domain protein [141577] (1 species)

   • Species Cyanothece sp. atcc 51142 [TaxId:43989] [141578] (2 PDB entries)

3. NP275-NP276 [141575] (1 species)
   Two consecuitive ORFs in the same frame that maintain the sequence periodicity; probable single ORF disrupted by the nonsense mutation

   • Species Nostoc punctiforme [TaxId:272131] [141576] (2 PDB entries)

4. automated matches [190517] (1 species)
   not a true protein

   • Species Mycobacterium tuberculosis [TaxId:83332] [187473] (4 PDB entries)

More info for Family b.80.8.1: Pentapeptide repeats

Timeline for Family b.80.8.1: Pentapeptide repeats:

• Family b.80.8.1: Pentapeptide repeats first appeared in SCOP 1.73
  
• Family b.80.8.1: Pentapeptide repeats appears in SCOP 1.75
  
• Family b.80.8.1: Pentapeptide repeats appears in SCOPe 2.02
  
• Family b.80.8.1: Pentapeptide repeats appears in the current release, SCOPe 2.08