Lineage for Protein: L,D-transpeptidase, C-terminal, catalytic domain

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2825385Fold b.160: L,D-transpeptidase catalytic domain-like [141522] (1 superfamily)
    barrel, closed; n=8, S=10; one overside connection
  4. 2825386Superfamily b.160.1: L,D-transpeptidase catalytic domain-like [141523] (1 family) (S)
    automatically mapped to Pfam PF03734
  5. 2825387Family b.160.1.1: L,D-transpeptidase catalytic domain-like [141524] (3 proteins)
    Pfam PF03734; ErfK/YbiS/YcfS/YnhG
  6. 2825392Protein L,D-transpeptidase, C-terminal, catalytic domain [141525] (2 species)

Species:

  1. 2825393Enterococcus faecium [TaxId:1352] [141526] (2 PDB entries)
    Uniprot Q3Y185 339-466
    1. Domain for 1zat:
    2. Domains for 2hkl:
      1. 2825395Domain d2hkla2: 2hkl A:339-466 [230767]
        Other proteins in same PDB: d2hkla1, d2hklb1, d2hklc1
        automated match to d1zata1
        complexed with so4; mutant
      2. 2825396Domain d2hklb2: 2hkl B:339-466 [230769]
        Other proteins in same PDB: d2hkla1, d2hklb1, d2hklc1
        automated match to d1zata1
        complexed with so4; mutant
      3. 2825397Domain d2hklc2: 2hkl C:339-466 [230771]
        Other proteins in same PDB: d2hkla1, d2hklb1, d2hklc1
        automated match to d1zata1
        complexed with so4; mutant
  2. 2825398Mycobacterium tuberculosis [TaxId:1773] [419619] (6 PDB entries)
    1. Domain for 3tur:
    2. Domain for 3tx4:
    3. Domains for 3u1p:
      1. 2825405Domain d3u1pa2: 3u1p A:252-407 [413459]
        Other proteins in same PDB: d3u1pa1, d3u1pb1
        automated match to d3tura2
        complexed with peg
      2. 2825406Domain d3u1pb2: 3u1p B:252-407 [413461]
        Other proteins in same PDB: d3u1pa1, d3u1pb1
        automated match to d3tura2
        complexed with peg
    4. Domains for 3u1q:
      1. 2825403Domain d3u1qa2: 3u1q A:252-407 [413463]
        Other proteins in same PDB: d3u1qa1, d3u1qb1
        automated match to d3tura2
        complexed with bme, peg
      2. 2825404Domain d3u1qb2: 3u1q B:252-407 [413465]
        Other proteins in same PDB: d3u1qa1, d3u1qb1
        automated match to d3tura2
        complexed with bme, peg
    5. Domains for 3vae:
      1. 2825407Domain d3vaea2: 3vae A:252-407 [413498]
        Other proteins in same PDB: d3vaea1, d3vaeb1
        automated match to d3tura2
        complexed with peg
      2. 2825408Domain d3vaeb2: 3vae B:252-407 [413500]
        Other proteins in same PDB: d3vaea1, d3vaeb1
        automated match to d3tura2
        complexed with peg
    6. Domains for 4huc:
      1. 2825399Domain d4huca2: 4huc A:252-408 [413832]
        Other proteins in same PDB: d4huca1, d4huca3, d4hucb1
        automated match to d3tura2
        complexed with act, na
      2. 2825400Domain d4hucb2: 4huc B:252-408 [413835]
        Other proteins in same PDB: d4huca1, d4huca3, d4hucb1
        automated match to d3tura2
        complexed with act, na

More info for Protein L,D-transpeptidase, C-terminal, catalytic domain from b.160.1.1: L,D-transpeptidase catalytic domain-like

Timeline for Protein L,D-transpeptidase, C-terminal, catalytic domain from b.160.1.1: L,D-transpeptidase catalytic domain-like:

  • Protein L,D-transpeptidase, C-terminal, catalytic domain from b.160.1.1: L,D-transpeptidase catalytic domain-like first appeared in SCOP 1.73
  • Protein L,D-transpeptidase, C-terminal, catalytic domain from b.160.1.1: L,D-transpeptidase catalytic domain-like appears in SCOPe 2.07