SCOPe 2.07: Family b.45.1.3: UbiD middle domain-like

Lineage for Family b.45.1.3: UbiD middle domain-like

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.45: Split barrel-like [50474] (3 superfamilies)
   barrel; n=6, S=10; greek-key

4. Superfamily b.45.1: FMN-binding split barrel [50475] (5 families)
   related to the ferredoxin reductase-like FAD-binding domain

5. Family b.45.1.3: UbiD middle domain-like [141368] (2 proteins)
   N terminal part of Pfam PF01977; overall structural similarity to one subunit of the NADH:FMN oxidoreductase-like family (50482); not known to bind a flavin cofactor; also includes the N-terminal alpha+beta subdomain (~110 residues)

Proteins:

1. 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [141369] (1 species)

   • Species Escherichia coli [TaxId:562] [141370] (1 PDB entry)
     Uniprot P0AAB4 6-325

2. automated matches [327997] (2 species)
   not a true protein

   1. Species Escherichia coli [TaxId:199310] [328004] (3 PDB entries)

   2. Species Escherichia coli [TaxId:562] [327998] (1 PDB entry)

More info for Family b.45.1.3: UbiD middle domain-like

Timeline for Family b.45.1.3: UbiD middle domain-like:

• Family b.45.1.3: UbiD middle domain-like first appeared in SCOP 1.73
  
• Family b.45.1.3: UbiD middle domain-like appears in SCOPe 2.06
  
• Family b.45.1.3: UbiD middle domain-like appears in the current release, SCOPe 2.08