SCOPe 2.08: Protein: ATP-dependent helicase CHD1 (Chromo domain protein 1)

Lineage for Protein: ATP-dependent helicase CHD1 (Chromo domain protein 1)

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.34: SH3-like barrel [50036] (21 superfamilies)
barrel, partly opened; n*=4, S*=8; meander
the last strand is interrupted by a turn of 3-10 helix
Superfamily b.34.13: Chromo domain-like [54160] (4 families)
SH3-like barrel is capped by a C-terminal helix

Family b.34.13.2: Chromo domain [54165] (8 proteins)
lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold

Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) [141220] (2 species)

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [141222] (2 PDB entries)
Uniprot P32657 172-252! Uniprot P32657 249-347
1. Domain for 2dy7:
  - Domain d2dy7a1: 2dy7 A:172-252 [131891]
    1st chromodomain
2. Domain for 2dy8:
  - Domain d2dy8a1: 2dy8 A:279-347 [131892]
    2nd chromodomain
Human (Homo sapiens) [TaxId:9606] [141221] (5 PDB entries)
Uniprot O14646 269-366! Uniprot O14646 270-355! Uniprot O14646 366-445! Uniprot O14646 367-443! Uniprot O14646 367-445
1. Domains for 2b2t:
  1. Domain d2b2ta1: 2b2t A:11-107 [127728]
    Other proteins in same PDB: d2b2ta3, d2b2tb3
  2. Domain d2b2ta2: 2b2t A:109-185 [127729]
    Other proteins in same PDB: d2b2ta3, d2b2tb3
  3. Domain d2b2tb1: 2b2t B:11-107 [127730]
    Other proteins in same PDB: d2b2ta3, d2b2tb3
    automatically matched to 2B2T A:11-107
  4. Domain d2b2tb2: 2b2t B:109-185 [127731]
    Other proteins in same PDB: d2b2ta3, d2b2tb3
    automatically matched to 2B2T A:109-186
  5. Domain d2b2tc1: 2b2t C:12-97 [127732]
    Other proteins in same PDB: d2b2ta3, d2b2tb3
2. Domains for 2b2u:
  1. Domain d2b2ua1: 2b2u A:108-185 [127733]
    Other proteins in same PDB: d2b2ua3
  2. Domain d2b2ua2: 2b2u A:13-107 [127734]
    Other proteins in same PDB: d2b2ua3
  3. Domain d2b2ub1: 2b2u B:108-185 [127735]
    Other proteins in same PDB: d2b2ua3
    automatically matched to 2B2U A:108-187
  4. Domain d2b2ub2: 2b2u B:13-107 [127736]
    Other proteins in same PDB: d2b2ua3
    automatically matched to 2B2U A:13-107
  5. Domain d2b2uc1: 2b2u C:13-97 [127737]
    Other proteins in same PDB: d2b2ua3
    automatically matched to 2B2T C:12-97
3. Domains for 2b2v:
  1. Domain d2b2va1: 2b2v A:108-185 [127738]
    Other proteins in same PDB: d2b2va3
    automatically matched to 2B2U A:108-187
  2. Domain d2b2va2: 2b2v A:13-107 [127739]
    Other proteins in same PDB: d2b2va3
    automatically matched to 2B2U A:13-107
  3. Domain d2b2vb1: 2b2v B:108-185 [127740]
    Other proteins in same PDB: d2b2va3
    automatically matched to 2B2U A:108-187
  4. Domain d2b2vb2: 2b2v B:13-107 [127741]
    Other proteins in same PDB: d2b2va3
    automatically matched to 2B2U A:13-107
  5. Domain d2b2vc1: 2b2v C:13-97 [127742]
    Other proteins in same PDB: d2b2va3
    automatically matched to 2B2T C:12-97
4. Domains for 2b2w:
  1. Domain d2b2wa1: 2b2w A:108-185 [127743]
    Other proteins in same PDB: d2b2wa3, d2b2wb3
    automatically matched to 2B2U A:108-187
  2. Domain d2b2wa2: 2b2w A:13-107 [127744]
    Other proteins in same PDB: d2b2wa3, d2b2wb3
    automatically matched to 2B2U A:13-107
  3. Domain d2b2wb1: 2b2w B:108-185 [127745]
    Other proteins in same PDB: d2b2wa3, d2b2wb3
    automatically matched to 2B2U A:108-187
  4. Domain d2b2wb2: 2b2w B:13-107 [127746]
    Other proteins in same PDB: d2b2wa3, d2b2wb3
    automatically matched to 2B2U A:13-107
  5. Domain d2b2wc1: 2b2w C:12-96 [127747]
    Other proteins in same PDB: d2b2wa3, d2b2wb3
    automatically matched to 2B2T C:12-97
5. Domains for 2b2y:
  1. Domain d2b2ya1: 2b2y A:108-185 [127754]
    Other proteins in same PDB: d2b2ya3, d2b2yb3
    automated match to d2b2ua1
  2. Domain d2b2ya2: 2b2y A:12-107 [127755]
    Other proteins in same PDB: d2b2ya3, d2b2yb3
    automated match to d2b2ua2
  3. Domain d2b2yb1: 2b2y B:108-185 [127756]
    Other proteins in same PDB: d2b2ya3, d2b2yb3
    automated match to d2b2ua1
  4. Domain d2b2yb2: 2b2y B:11-107 [127757]
    Other proteins in same PDB: d2b2ya3, d2b2yb3
    automated match to d2b2ua2
  5. Domain d2b2yc_: 2b2y C: [127758]
    Other proteins in same PDB: d2b2ya3, d2b2yb3
    automated match to d2b2tc1

More info for Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) from b.34.13.2: Chromo domain

Timeline for Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) from b.34.13.2: Chromo domain:

Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) from b.34.13.2: Chromo domain first appeared in SCOP 1.73
Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) from b.34.13.2: Chromo domain appears in SCOPe 2.07