Lineage for Protein: ATP-dependent helicase CHD1 (Chromo domain protein 1)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2045654Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2047511Superfamily b.34.13: Chromo domain-like [54160] (4 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. 2047551Family b.34.13.2: Chromo domain [54165] (8 protein domains)
    lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold
  6. 2047552Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) [141220] (2 species)

Species:

  1. 2047553Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [141222] (2 PDB entries)
    Uniprot P32657 172-252! Uniprot P32657 249-347
    1. Domain for 2dy7:
    2. Domain for 2dy8:
  2. 2047556Human (Homo sapiens) [TaxId:9606] [141221] (5 PDB entries)
    Uniprot O14646 269-366! Uniprot O14646 270-355! Uniprot O14646 366-445! Uniprot O14646 367-443! Uniprot O14646 367-445
    1. Domains for 2b2t:
      1. 2047567Domain d2b2ta1: 2b2t A:11-107 [127728]
        Other proteins in same PDB: d2b2ta3, d2b2tb3
      2. 2047568Domain d2b2ta2: 2b2t A:109-185 [127729]
        Other proteins in same PDB: d2b2ta3, d2b2tb3
      3. 2047569Domain d2b2tb1: 2b2t B:11-107 [127730]
        Other proteins in same PDB: d2b2ta3, d2b2tb3
        automatically matched to 2B2T A:11-107
      4. 2047570Domain d2b2tb2: 2b2t B:109-185 [127731]
        Other proteins in same PDB: d2b2ta3, d2b2tb3
        automatically matched to 2B2T A:109-186
      5. 2047571Domain d2b2tc1: 2b2t C:12-97 [127732]
        Other proteins in same PDB: d2b2ta3, d2b2tb3
    2. Domains for 2b2u:
      1. 2047577Domain d2b2ua1: 2b2u A:108-185 [127733]
        Other proteins in same PDB: d2b2ua3
      2. 2047578Domain d2b2ua2: 2b2u A:13-107 [127734]
        Other proteins in same PDB: d2b2ua3
      3. 2047579Domain d2b2ub1: 2b2u B:108-185 [127735]
        Other proteins in same PDB: d2b2ua3
        automatically matched to 2B2U A:108-187
      4. 2047580Domain d2b2ub2: 2b2u B:13-107 [127736]
        Other proteins in same PDB: d2b2ua3
        automatically matched to 2B2U A:13-107
      5. 2047581Domain d2b2uc1: 2b2u C:13-97 [127737]
        Other proteins in same PDB: d2b2ua3
        automatically matched to 2B2T C:12-97
    3. Domains for 2b2v:
      1. 2047572Domain d2b2va1: 2b2v A:108-185 [127738]
        Other proteins in same PDB: d2b2va3
        automatically matched to 2B2U A:108-187
      2. 2047573Domain d2b2va2: 2b2v A:13-107 [127739]
        Other proteins in same PDB: d2b2va3
        automatically matched to 2B2U A:13-107
      3. 2047574Domain d2b2vb1: 2b2v B:108-185 [127740]
        Other proteins in same PDB: d2b2va3
        automatically matched to 2B2U A:108-187
      4. 2047575Domain d2b2vb2: 2b2v B:13-107 [127741]
        Other proteins in same PDB: d2b2va3
        automatically matched to 2B2U A:13-107
      5. 2047576Domain d2b2vc1: 2b2v C:13-97 [127742]
        Other proteins in same PDB: d2b2va3
        automatically matched to 2B2T C:12-97
    4. Domains for 2b2w:
      1. 2047562Domain d2b2wa1: 2b2w A:108-185 [127743]
        Other proteins in same PDB: d2b2wa3, d2b2wb3
        automatically matched to 2B2U A:108-187
      2. 2047563Domain d2b2wa2: 2b2w A:13-107 [127744]
        Other proteins in same PDB: d2b2wa3, d2b2wb3
        automatically matched to 2B2U A:13-107
      3. 2047564Domain d2b2wb1: 2b2w B:108-185 [127745]
        Other proteins in same PDB: d2b2wa3, d2b2wb3
        automatically matched to 2B2U A:108-187
      4. 2047565Domain d2b2wb2: 2b2w B:13-107 [127746]
        Other proteins in same PDB: d2b2wa3, d2b2wb3
        automatically matched to 2B2U A:13-107
      5. 2047566Domain d2b2wc1: 2b2w C:12-96 [127747]
        Other proteins in same PDB: d2b2wa3, d2b2wb3
        automatically matched to 2B2T C:12-97
    5. Domains for 2b2y:
      1. 2047557Domain d2b2ya1: 2b2y A:108-185 [127754]
        Other proteins in same PDB: d2b2ya3, d2b2yb3
        automated match to d2b2ua1
      2. 2047558Domain d2b2ya2: 2b2y A:12-107 [127755]
        Other proteins in same PDB: d2b2ya3, d2b2yb3
        automated match to d2b2ua2
      3. 2047559Domain d2b2yb1: 2b2y B:108-185 [127756]
        Other proteins in same PDB: d2b2ya3, d2b2yb3
        automated match to d2b2ua1
      4. 2047560Domain d2b2yb2: 2b2y B:11-107 [127757]
        Other proteins in same PDB: d2b2ya3, d2b2yb3
        automated match to d2b2ua2
      5. 2047561Domain d2b2yc_: 2b2y C: [127758]
        Other proteins in same PDB: d2b2ya3, d2b2yb3
        automated match to d2b2tc1

More info for Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) from b.34.13.2: Chromo domain

Timeline for Protein ATP-dependent helicase CHD1 (Chromo domain protein 1) from b.34.13.2: Chromo domain: