Lineage for Species: Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2053585Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2053586Superfamily b.34.1: C-terminal domain of transcriptional repressors [50037] (4 families) (S)
    the N-terminal domains of these repressors bind DNA
  5. 2053587Family b.34.1.1: Biotin repressor (BirA) [50038] (2 proteins)
    automatically mapped to Pfam PF02237
  6. 2053596Protein Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain [141186] (1 species)
  7. 2053597Species Pyrococcus horikoshii [TaxId:53953] [141187] (27 PDB entries)
    Uniprot O57883 189-235

PDB entries in Species: Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 1wnl:
    1. 2053618Domain d1wnla1: 1wnl A:189-235 [121094]
      Other proteins in same PDB: d1wnla2, d1wnlb2
      complexed with adp, gol
    2. 2053619Domain d1wnlb1: 1wnl B:189-235 [121096]
      Other proteins in same PDB: d1wnla2, d1wnlb2
      automated match to d1wnla1
      complexed with adp, gol
  2. Domain(s) for 1wpy:
    1. 2053622Domain d1wpya1: 1wpy A:189-235 [121157]
      Other proteins in same PDB: d1wpya2, d1wpyb2
      automated match to d1wnla1
      complexed with btn
    2. 2053623Domain d1wpyb1: 1wpy B:189-235 [121159]
      Other proteins in same PDB: d1wpya2, d1wpyb2
      automated match to d1wnla1
      complexed with btn
  3. Domain(s) for 1wq7:
    1. 2053628Domain d1wq7a1: 1wq7 A:189-235 [121165]
      Other proteins in same PDB: d1wq7a2, d1wq7b2
      automated match to d1wnla1
    2. 2053629Domain d1wq7b1: 1wq7 B:189-235 [121167]
      Other proteins in same PDB: d1wq7a2, d1wq7b2
      automated match to d1wnla1
  4. Domain(s) for 1wqw:
    1. 2053612Domain d1wqwa1: 1wqw A:189-235 [121179]
      Other proteins in same PDB: d1wqwa2, d1wqwb2
      automated match to d1wnla1
      complexed with bt5
    2. 2053613Domain d1wqwb1: 1wqw B:189-235 [121181]
      Other proteins in same PDB: d1wqwa2, d1wqwb2
      automated match to d1wnla1
      complexed with bt5
  5. Domain(s) for 1x01:
    1. 2053642Domain d1x01a1: 1x01 A:189-235 [121537]
      Other proteins in same PDB: d1x01a2, d1x01b2
      automated match to d1wnla1
      complexed with acy, atp, po4
    2. 2053643Domain d1x01b1: 1x01 B:189-235 [121539]
      Other proteins in same PDB: d1x01a2, d1x01b2
      automated match to d1wnla1
      complexed with acy, atp, po4
  6. Domain(s) for 2deq:
    1. 2053634Domain d2deqa2: 2deq A:189-235 [230663]
      Other proteins in same PDB: d2deqa1, d2deqb1
      automated match to d2zgwa1
      complexed with bt5; mutant
    2. 2053635Domain d2deqb2: 2deq B:189-234 [230664]
      Other proteins in same PDB: d2deqa1, d2deqb1
      automated match to d2zgwa1
      complexed with bt5; mutant
  7. Domain(s) for 2djz:
    1. 2053632Domain d2djza2: 2djz A:189-235 [230667]
      Other proteins in same PDB: d2djza1, d2djzb1
      automated match to d2zgwa1
      complexed with bt5; mutant
    2. 2053633Domain d2djzb2: 2djz B:189-232 [230669]
      Other proteins in same PDB: d2djza1, d2djzb1
      automated match to d2zgwa1
      complexed with bt5; mutant
  8. Domain(s) for 2dkg:
    1. 2053640Domain d2dkga1: 2dkg A:189-235 [131551]
      Other proteins in same PDB: d2dkga2, d2dkgb2
      automated match to d1wnla1
      complexed with bt5, mg, pop
    2. 2053641Domain d2dkgb1: 2dkg B:189-235 [131553]
      Other proteins in same PDB: d2dkga2, d2dkgb2
      automated match to d1wnla1
      complexed with bt5, mg, pop
  9. Domain(s) for 2dth:
    1. 2053646Domain d2dtha1: 2dth A:189-235 [131713]
      Other proteins in same PDB: d2dtha2, d2dthb2
      automated match to d1wnla1
      complexed with adp, btn
    2. 2053647Domain d2dthb1: 2dth B:189-235 [131715]
      Other proteins in same PDB: d2dtha2, d2dthb2
      automated match to d1wnla1
      complexed with adp, btn
  10. Domain(s) for 2dti:
    1. 2053648Domain d2dtia1: 2dti A:189-235 [131717]
      Other proteins in same PDB: d2dtia2, d2dtib2
      automated match to d1wnla1
      complexed with bt5, mn, pop
    2. 2053649Domain d2dtib1: 2dti B:189-235 [131719]
      Other proteins in same PDB: d2dtia2, d2dtib2
      automated match to d1wnla1
      complexed with bt5, mn, pop
  11. Domain(s) for 2dto:
    1. 2053614Domain d2dtoa1: 2dto A:189-235 [131721]
      Other proteins in same PDB: d2dtoa2, d2dtob2
      automated match to d1wnla1
      complexed with atp, btn
    2. 2053615Domain d2dtob1: 2dto B:189-235 [131723]
      Other proteins in same PDB: d2dtoa2, d2dtob2
      automated match to d1wnla1
      complexed with atp, btn
  12. Domain(s) for 2dve:
    1. 2053620Domain d2dvea2: 2dve A:189-235 [230661]
      Other proteins in same PDB: d2dvea1, d2dveb1
      automated match to d2zgwa1
      complexed with bt5; mutant
    2. 2053621Domain d2dveb2: 2dve B:189-235 [230662]
      Other proteins in same PDB: d2dvea1, d2dveb1
      automated match to d2zgwa1
      complexed with bt5; mutant
  13. Domain(s) for 2dxt:
    1. 2053616Domain d2dxta2: 2dxt A:189-235 [230671]
      Other proteins in same PDB: d2dxta1, d2dxtb1
      automated match to d2zgwa1
      complexed with atp, btn; mutant
    2. 2053617Domain d2dxtb2: 2dxt B:189-235 [230673]
      Other proteins in same PDB: d2dxta1, d2dxtb1
      automated match to d2zgwa1
      complexed with atp, btn; mutant
  14. Domain(s) for 2dxu:
    1. 2053598Domain d2dxua2: 2dxu A:189-235 [230675]
      Other proteins in same PDB: d2dxua1, d2dxub1
      automated match to d2zgwa1
      complexed with bt5; mutant
    2. 2053599Domain d2dxub2: 2dxu B:189-226 [230677]
      Other proteins in same PDB: d2dxua1, d2dxub1
      automated match to d2zgwa1
      complexed with bt5; mutant
  15. Domain(s) for 2dz9:
    1. 2053636Domain d2dz9a2: 2dz9 A:189-235 [241658]
      Other proteins in same PDB: d2dz9a1, d2dz9b1
      automated match to d2dxta2
      complexed with bt5; mutant
    2. 2053637Domain d2dz9b2: 2dz9 B:189-235 [241660]
      Other proteins in same PDB: d2dz9a1, d2dz9b1
      automated match to d2dxta2
      complexed with bt5; mutant
  16. Domain(s) for 2dzc:
    1. 2053610Domain d2dzca2: 2dzc A:189-235 [241662]
      Other proteins in same PDB: d2dzca1, d2dzcb1
      automated match to d2dxua2
      mutant
    2. 2053611Domain d2dzcb2: 2dzc B:189-235 [241664]
      Other proteins in same PDB: d2dzca1, d2dzcb1
      automated match to d2dxua2
      mutant
  17. Domain(s) for 2e10:
    1. 2053600Domain d2e10a2: 2e10 A:189-235 [241675]
      Other proteins in same PDB: d2e10a1, d2e10b1
      automated match to d2dvea2
      mutant
    2. 2053601Domain d2e10b2: 2e10 B:189-235 [241677]
      Other proteins in same PDB: d2e10a1, d2e10b1
      automated match to d2dvea2
      mutant
  18. Domain(s) for 2e1h:
    1. 2053602Domain d2e1ha2: 2e1h A:189-235 [241679]
      Other proteins in same PDB: d2e1ha1, d2e1hb1
      automated match to d2deqa2
      mutant
    2. 2053603Domain d2e1hb2: 2e1h B:189-235 [241681]
      Other proteins in same PDB: d2e1ha1, d2e1hb1
      automated match to d2deqa2
      mutant
  19. Domain(s) for 2e3y:
    1. 2053606Domain d2e3ya2: 2e3y A:189-235 [303754]
      Other proteins in same PDB: d2e3ya1, d2e3yb1
      automated match to d2zgwa1
      complexed with adn, btn; mutant
    2. 2053607Domain d2e3yb2: 2e3y B:189-235 [303756]
      Other proteins in same PDB: d2e3ya1, d2e3yb1
      automated match to d2zgwa1
      complexed with adn, btn; mutant
  20. Domain(s) for 2e41:
    1. 2053630Domain d2e41a1: 2e41 A:189-235 [146679]
      Other proteins in same PDB: d2e41a2, d2e41b2
      automated match to d2zgwa1
      complexed with btx; mutant
    2. 2053631Domain d2e41b1: 2e41 B:189-232 [146681]
      Other proteins in same PDB: d2e41a2, d2e41b2
      automated match to d2zgwa1
      complexed with btx; mutant
  21. Domain(s) for 2e64:
    1. 2053608Domain d2e64a1: 2e64 A:189-235 [146697]
      Other proteins in same PDB: d2e64a2, d2e64b2
      automated match to d2zgwa1
      mutant
    2. 2053609Domain d2e64b1: 2e64 B:189-235 [146699]
      Other proteins in same PDB: d2e64a2, d2e64b2
      automated match to d2zgwa1
      mutant
  22. Domain(s) for 2e65:
    1. 2053626Domain d2e65a2: 2e65 A:189-235 [241691]
      Other proteins in same PDB: d2e65a1, d2e65b1
      automated match to d2dxta2
      mutant
    2. 2053627Domain d2e65b2: 2e65 B:189-235 [241693]
      Other proteins in same PDB: d2e65a1, d2e65b1
      automated match to d2dxta2
      mutant
  23. Domain(s) for 2ejf:
    1. 2053644Domain d2ejfa1: 2ejf A:189-235 [146871]
      Other proteins in same PDB: d2ejfa2, d2ejfb2
      automated match to d2zgwa1
      complexed with adn, btn, gol; mutant
    2. 2053645Domain d2ejfb1: 2ejf B:189-231 [146873]
      Other proteins in same PDB: d2ejfa2, d2ejfb2
      automated match to d2zgwa1
      complexed with adn, btn, gol; mutant
  24. Domain(s) for 2ejg:
    1. 2053650Domain d2ejga2: 2ejg A:189-235 [241769]
      Other proteins in same PDB: d2ejga1, d2ejgb1
      automated match to d2dxua2
      complexed with adn, btn; mutant
    2. 2053651Domain d2ejgb2: 2ejg B:189-231 [241771]
      Other proteins in same PDB: d2ejga1, d2ejgb1
      automated match to d2dxua2
      complexed with adn, btn; mutant
  25. Domain(s) for 2fyk:
    1. 2053624Domain d2fyka1: 2fyk A:189-235 [134374]
      Other proteins in same PDB: d2fyka2, d2fykb2
      automated match to d1wnla1
      complexed with adp, btn
    2. 2053625Domain d2fykb1: 2fyk B:189-235 [134376]
      Other proteins in same PDB: d2fyka2, d2fykb2
      automated match to d1wnla1
      complexed with adp, btn
  26. Domain(s) for 2hni:
    1. 2053638Domain d2hnia2: 2hni A:189-235 [242047]
      Other proteins in same PDB: d2hnia1, d2hnib1
      automated match to d2djza2
      complexed with acy; mutant
    2. 2053639Domain d2hnib2: 2hni B:189-235 [242049]
      Other proteins in same PDB: d2hnia1, d2hnib1
      automated match to d2djza2
      complexed with acy; mutant
  27. Domain(s) for 2zgw:
    1. 2053604Domain d2zgwa1: 2zgw A:189-235 [154421]
      Other proteins in same PDB: d2zgwa2, d2zgwb2
      complexed with adn, btn; mutant
    2. 2053605Domain d2zgwb1: 2zgw B:189-235 [154423]
      Other proteins in same PDB: d2zgwa2, d2zgwb2
      automated match to d2zgwa1
      complexed with adn, btn; mutant

More info for Species Pyrococcus horikoshii [TaxId:53953] from b.34.1.1 Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain

Timeline for Species Pyrococcus horikoshii [TaxId:53953] from b.34.1.1 Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain: