Lineage for Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 665027Fold b.34: SH3-like barrel [50036] (18 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 665028Superfamily b.34.1: C-terminal domain of transcriptional repressors [50037] (3 families) (S)
    the N-terminal domains of these repressors bind DNA
  5. 665029Family b.34.1.1: Biotin repressor (BirA) [50038] (2 proteins)
  6. 665038Protein Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain [141186] (1 species)
  7. 665039Species Archaeon Pyrococcus horikoshii [TaxId:53953] [141187] (10 PDB entries)

PDB entries in Species: Archaeon Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 1wnl:
    1. 665044Domain d1wnla1: 1wnl A:189-235 [121094]
      Other proteins in same PDB: d1wnla2, d1wnlb2
      complexed with adp, gol
    2. 665045Domain d1wnlb1: 1wnl B:189-235 [121096]
      Other proteins in same PDB: d1wnla2, d1wnlb2
      automatically matched to 1WNL A:189-235
      complexed with adp, gol
  2. Domain(s) for 1wpy:
    1. 665046Domain d1wpya1: 1wpy A:189-235 [121157]
      Other proteins in same PDB: d1wpya2, d1wpyb2
      automatically matched to 1WNL A:189-235
      complexed with btn
    2. 665047Domain d1wpyb1: 1wpy B:189-235 [121159]
      Other proteins in same PDB: d1wpya2, d1wpyb2
      automatically matched to 1WNL A:189-235
      complexed with btn
  3. Domain(s) for 1wq7:
    1. 665050Domain d1wq7a1: 1wq7 A:189-235 [121165]
      Other proteins in same PDB: d1wq7a2, d1wq7b2
      automatically matched to 1WNL A:189-235
    2. 665051Domain d1wq7b1: 1wq7 B:189-235 [121167]
      Other proteins in same PDB: d1wq7a2, d1wq7b2
      automatically matched to 1WNL A:189-235
  4. Domain(s) for 1wqw:
    1. 665040Domain d1wqwa1: 1wqw A:189-235 [121179]
      Other proteins in same PDB: d1wqwa2, d1wqwb2
      automatically matched to 1WNL A:189-235
      complexed with bt5
    2. 665041Domain d1wqwb1: 1wqw B:189-235 [121181]
      Other proteins in same PDB: d1wqwa2, d1wqwb2
      automatically matched to 1WNL A:189-235
      complexed with bt5
  5. Domain(s) for 1x01:
    1. 665052Domain d1x01a1: 1x01 A:189-235 [121537]
      Other proteins in same PDB: d1x01a2, d1x01b2
      automatically matched to 1WNL A:189-235
      complexed with acy, atp, po4
    2. 665053Domain d1x01b1: 1x01 B:189-235 [121539]
      Other proteins in same PDB: d1x01a2, d1x01b2
      automatically matched to 1WNL A:189-235
      complexed with acy, atp, po4
  6. Domain(s) for 2dkg:
    1. 665054Domain d2dkga1: 2dkg A:189-235 [131551]
      Other proteins in same PDB: d2dkga2, d2dkgb2
      automatically matched to 1WNL A:189-235
      complexed with bt5, mg, pop
    2. 665055Domain d2dkgb1: 2dkg B:189-235 [131553]
      Other proteins in same PDB: d2dkga2, d2dkgb2
      automatically matched to 1WNL A:189-235
      complexed with bt5, mg, pop
  7. Domain(s) for 2dth:
    1. 665056Domain d2dtha1: 2dth A:189-235 [131713]
      Other proteins in same PDB: d2dtha2, d2dthb2
      automatically matched to 1WNL A:189-235
      complexed with adp, btn
    2. 665057Domain d2dthb1: 2dth B:189-235 [131715]
      Other proteins in same PDB: d2dtha2, d2dthb2
      automatically matched to 1WNL A:189-235
      complexed with adp, btn
  8. Domain(s) for 2dti:
    1. 665058Domain d2dtia1: 2dti A:189-235 [131717]
      Other proteins in same PDB: d2dtia2, d2dtib2
      automatically matched to 1WNL A:189-235
      complexed with bt5, mn, pop
    2. 665059Domain d2dtib1: 2dti B:189-235 [131719]
      Other proteins in same PDB: d2dtia2, d2dtib2
      automatically matched to 1WNL A:189-235
      complexed with bt5, mn, pop
  9. Domain(s) for 2dto:
    1. 665042Domain d2dtoa1: 2dto A:189-235 [131721]
      Other proteins in same PDB: d2dtoa2, d2dtob2
      automatically matched to 1WNL A:189-235
      complexed with atp, btn
    2. 665043Domain d2dtob1: 2dto B:189-235 [131723]
      Other proteins in same PDB: d2dtoa2, d2dtob2
      automatically matched to 1WNL A:189-235
      complexed with atp, btn
  10. Domain(s) for 2fyk:
    1. 665048Domain d2fyka1: 2fyk A:189-235 [134374]
      Other proteins in same PDB: d2fyka2, d2fykb2
      automatically matched to 1WNL A:189-235
      complexed with adp, btn
    2. 665049Domain d2fykb1: 2fyk B:189-235 [134376]
      Other proteins in same PDB: d2fyka2, d2fykb2
      automatically matched to 1WNL A:189-235
      complexed with adp, btn

More info for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from b.34.1.1 Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain

Timeline for Species Archaeon Pyrococcus horikoshii [TaxId:53953] from b.34.1.1 Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain:

  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from b.34.1.1 Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain is new in SCOP 1.73
  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from b.34.1.1 Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain appears in SCOP 1.75
  • Species Archaeon Pyrococcus horikoshii [TaxId:53953] from b.34.1.1 Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain appears in the current release, SCOPe 2.08, called Species Pyrococcus horikoshii [TaxId:53953] from b.34.1.1 Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain