SCOPe 2.07: Protein: Beta-D-xylosidase C-terminal domain

Lineage for Protein: Beta-D-xylosidase C-terminal domain

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
sandwich; 12-14 strands in 2 sheets; complex topology
Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families)
Family b.29.1.23: Beta-D-xylosidase C-terminal domain-like [141161] (1 protein)
Protein Beta-D-xylosidase C-terminal domain [141162] (4 species)

Species:

Bacillus halodurans [TaxId:86665] [141166] (1 PDB entry)
Uniprot Q9K6P5 321-525
- Domains for 1yrz:
  1. Domain d1yrza1: 1yrz A:1321-1525 [123948]
    Other proteins in same PDB: d1yrza2, d1yrzb2
  2. Domain d1yrzb1: 1yrz B:2321-2525 [123950]
    Other proteins in same PDB: d1yrza2, d1yrzb2
    automated match to d1yrza1
Bacillus subtilis [TaxId:1423] [141163] (1 PDB entry)
Uniprot P94489 325-533
- Domains for 1yif:
  1. Domain d1yifa1: 1yif A:325-533 [123283]
    Other proteins in same PDB: d1yifa2, d1yifb2, d1yifc2, d1yifd2
  2. Domain d1yifb1: 1yif B:325-533 [123285]
    Other proteins in same PDB: d1yifa2, d1yifb2, d1yifc2, d1yifd2
    automated match to d1yifa1
  3. Domain d1yifc1: 1yif C:325-533 [123287]
    Other proteins in same PDB: d1yifa2, d1yifb2, d1yifc2, d1yifd2
    automated match to d1yifa1
  4. Domain d1yifd1: 1yif D:325-533 [123289]
    Other proteins in same PDB: d1yifa2, d1yifb2, d1yifc2, d1yifd2
    automated match to d1yifa1

Clostridium acetobutylicum [TaxId:1488] [141164] (2 PDB entries)
Uniprot Q97DM1 323-532

Domains for 1y7b:

Domain d1y7ba1: 1y7b A:325-534 [122687]
Other proteins in same PDB: d1y7ba2, d1y7ba3, d1y7ba4, d1y7bb2, d1y7bb3, d1y7bb4, d1y7bc2, d1y7bc3, d1y7bc4, d1y7bd2, d1y7bd3, d1y7bd4
complexed with ca, epe, gol, pge, so4

Domain d1y7bb1: 1y7b B:325-534 [122689]
Other proteins in same PDB: d1y7ba2, d1y7ba3, d1y7ba4, d1y7bb2, d1y7bb3, d1y7bb4, d1y7bc2, d1y7bc3, d1y7bc4, d1y7bd2, d1y7bd3, d1y7bd4
automated match to d1y7ba1
complexed with ca, epe, gol, pge, so4

Domain d1y7bc1: 1y7b C:325-534 [122691]
Other proteins in same PDB: d1y7ba2, d1y7ba3, d1y7ba4, d1y7bb2, d1y7bb3, d1y7bb4, d1y7bc2, d1y7bc3, d1y7bc4, d1y7bd2, d1y7bd3, d1y7bd4
automated match to d1y7ba1
complexed with ca, epe, gol, pge, so4

Domain d1y7bd1: 1y7b D:325-534 [122693]
Other proteins in same PDB: d1y7ba2, d1y7ba3, d1y7ba4, d1y7bb2, d1y7bb3, d1y7bb4, d1y7bc2, d1y7bc3, d1y7bc4, d1y7bd2, d1y7bd3, d1y7bd4
automated match to d1y7ba1
complexed with ca, epe, gol, pge, so4

Domains for 1yi7:

Domain d1yi7a1: 1yi7 A:325-534 [123268]
Other proteins in same PDB: d1yi7a2, d1yi7a3, d1yi7a4, d1yi7b2, d1yi7b3, d1yi7b4, d1yi7c2, d1yi7c3, d1yi7c4, d1yi7d2, d1yi7d3, d1yi7d4
automated match to d1y7ba1
complexed with ca, epe, gol, so4

Domain d1yi7b1: 1yi7 B:325-534 [123270]
Other proteins in same PDB: d1yi7a2, d1yi7a3, d1yi7a4, d1yi7b2, d1yi7b3, d1yi7b4, d1yi7c2, d1yi7c3, d1yi7c4, d1yi7d2, d1yi7d3, d1yi7d4
automated match to d1y7ba1
complexed with ca, epe, gol, so4

Domain d1yi7c1: 1yi7 C:325-534 [123272]
Other proteins in same PDB: d1yi7a2, d1yi7a3, d1yi7a4, d1yi7b2, d1yi7b3, d1yi7b4, d1yi7c2, d1yi7c3, d1yi7c4, d1yi7d2, d1yi7d3, d1yi7d4
automated match to d1y7ba1
complexed with ca, epe, gol, so4

Domain d1yi7d1: 1yi7 D:325-534 [123274]
Other proteins in same PDB: d1yi7a2, d1yi7a3, d1yi7a4, d1yi7b2, d1yi7b3, d1yi7b4, d1yi7c2, d1yi7c3, d1yi7c4, d1yi7d2, d1yi7d3, d1yi7d4
automated match to d1y7ba1
complexed with ca, epe, gol, so4

Geobacillus stearothermophilus [TaxId:1422] [141165] (4 PDB entries)
Uniprot Q68HB3 325-535
1. Domains for 2exh:
  1. Domain d2exha1: 2exh A:325-535 [132527]
    Other proteins in same PDB: d2exha2, d2exhb2, d2exhc2, d2exhd2
    complexed with ca, gol, mes
  2. Domain d2exhb1: 2exh B:325-535 [132529]
    Other proteins in same PDB: d2exha2, d2exhb2, d2exhc2, d2exhd2
    automated match to d2exha1
    complexed with ca, gol, mes
  3. Domain d2exhc1: 2exh C:325-535 [132531]
    Other proteins in same PDB: d2exha2, d2exhb2, d2exhc2, d2exhd2
    automated match to d2exha1
    complexed with ca, gol, mes
  4. Domain d2exhd1: 2exh D:325-535 [132533]
    Other proteins in same PDB: d2exha2, d2exhb2, d2exhc2, d2exhd2
    automated match to d2exha1
    complexed with ca, gol, mes
2. Domains for 2exi:
  1. Domain d2exia1: 2exi A:325-535 [132535]
    Other proteins in same PDB: d2exia2, d2exib2, d2exic2, d2exid2
    complexed with ca, gol, mes; mutant
  2. Domain d2exib1: 2exi B:325-535 [132537]
    Other proteins in same PDB: d2exia2, d2exib2, d2exic2, d2exid2
    automated match to d2exia1
    complexed with ca, gol, mes; mutant
  3. Domain d2exic1: 2exi C:325-535 [132539]
    Other proteins in same PDB: d2exia2, d2exib2, d2exic2, d2exid2
    automated match to d2exia1
    complexed with ca, gol, mes; mutant
  4. Domain d2exid1: 2exi D:325-535 [132541]
    Other proteins in same PDB: d2exia2, d2exib2, d2exic2, d2exid2
    automated match to d2exia1
    complexed with ca, gol, mes; mutant
3. Domains for 2exj:
  1. Domain d2exja1: 2exj A:325-535 [132543]
    Other proteins in same PDB: d2exja2, d2exjb2, d2exjc2, d2exjd2
    complexed with ca, gol, mes, xys; mutant
  2. Domain d2exjb1: 2exj B:325-535 [132545]
    Other proteins in same PDB: d2exja2, d2exjb2, d2exjc2, d2exjd2
    automated match to d2exja1
    complexed with ca, gol, mes, xys; mutant
  3. Domain d2exjc1: 2exj C:325-535 [132547]
    Other proteins in same PDB: d2exja2, d2exjb2, d2exjc2, d2exjd2
    automated match to d2exja1
    complexed with ca, gol, mes, xys; mutant
  4. Domain d2exjd1: 2exj D:325-535 [132549]
    Other proteins in same PDB: d2exja2, d2exjb2, d2exjc2, d2exjd2
    automated match to d2exja1
    complexed with ca, gol, mes, xys; mutant
4. Domains for 2exk:
  1. Domain d2exka1: 2exk A:325-535 [132551]
    Other proteins in same PDB: d2exka2, d2exkb2, d2exkc2, d2exkd2
    complexed with ca, gol, mes, xys
  2. Domain d2exkb1: 2exk B:325-535 [132553]
    Other proteins in same PDB: d2exka2, d2exkb2, d2exkc2, d2exkd2
    automated match to d2exka1
    complexed with ca, gol, mes, xys
  3. Domain d2exkc1: 2exk C:325-535 [132555]
    Other proteins in same PDB: d2exka2, d2exkb2, d2exkc2, d2exkd2
    automated match to d2exka1
    complexed with ca, gol, mes, xys
  4. Domain d2exkd1: 2exk D:325-535 [132557]
    Other proteins in same PDB: d2exka2, d2exkb2, d2exkc2, d2exkd2
    automated match to d2exka1
    complexed with ca, gol, mes, xys

More info for Protein Beta-D-xylosidase C-terminal domain from b.29.1.23: Beta-D-xylosidase C-terminal domain-like

Timeline for Protein Beta-D-xylosidase C-terminal domain from b.29.1.23: Beta-D-xylosidase C-terminal domain-like:

Protein Beta-D-xylosidase C-terminal domain from b.29.1.23: Beta-D-xylosidase C-terminal domain-like first appeared in SCOP 1.73
Protein Beta-D-xylosidase C-terminal domain from b.29.1.23: Beta-D-xylosidase C-terminal domain-like appears in SCOPe 2.06
Protein Beta-D-xylosidase C-terminal domain from b.29.1.23: Beta-D-xylosidase C-terminal domain-like appears in the current release, SCOPe 2.08